RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ZNF2Q9BSG1 426 aaPredicted RBP5.24□□□□□ -1.57
CLCN3-201ENST00000347613 SLC5A7Q9GZV3 580 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 TMEM100Q9NV29 134 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 MRPS17Q9Y2R5 130 aaKnown RBP5.24□□□□□ -1.57
CLCN3-201ENST00000347613 HDGFL3Q9Y3E1 203 aa5.24□□□□□ -1.57
CLCN3-201ENST00000347613 A0A0D9SG52 128 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 TEX13DA0A0J9YY54 714 aaPredicted RBP5.23□□□□□ -1.57
CLCN3-201ENST00000347613 TERTO14746 1132 aaKnown RBP5.23□□□□□ -1.57
CLCN3-201ENST00000347613 CXCL13O43927 109 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 IFNA6P05013 189 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 HKR1P10072 659 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 AMY2BP19961 511 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 NPBWR1P48145 328 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 SLC35A1P78382 337 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 ECH1Q13011 328 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 PDSS1Q5T2R2 415 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 Q6ZSR3 168 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 RPS19BP1Q86WX3 136 aaKnown RBP5.23□□□□□ -1.57
CLCN3-201ENST00000347613 OR10AD1Q8NGE0 317 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 THRSPQ92748 146 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 ADGRG7Q96K78 797 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 SIGLEC12Q96PQ1 595 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 SMIM3Q9BZL3 60 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 ARHGAP21Q5T5U3 1957 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 KANTRA0A1W2PQU2 76 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 TOR1AO14656 332 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 UBBP0CG47 229 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 ADH6P28332 368 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 ALDH3B1P43353 468 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 LSM6P62312 80 aaKnown RBP5.23□□□□□ -1.57
CLCN3-201ENST00000347613 UBA52P62987 128 aaKnown RBP5.23□□□□□ -1.57
CLCN3-201ENST00000347613 MC2RQ01718 297 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 C3AR1Q16581 482 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 CCDC157Q569K6 752 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 OR52M1Q8NGK5 317 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 SLC25A43Q8WUT9 341 aaPredicted RBP5.23□□□□□ -1.57
CLCN3-201ENST00000347613 EMG1Q92979 244 aaKnown RBP5.23□□□□□ -1.57
CLCN3-201ENST00000347613 NECAB3Q96P71 396 aaPredicted RBP5.23□□□□□ -1.57
CLCN3-201ENST00000347613 TM2D1Q9BX74 207 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 NMES1Q9C002 83 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 A0A096LPE4 126 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 A0A1W2PPZ6 126 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 FAM157AC9JC47 383 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 AGPAT2O15120 278 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 C1QL1O75973 258 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 CHRM2P08172 466 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 GSTP1P09211 210 aaKnown RBP5.23□□□□□ -1.57
CLCN3-201ENST00000347613 LYL1P12980 280 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 OTX2P32243 289 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF84P51523 738 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 MTCP1P56278 107 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 DSCR4P56555 118 aaPredicted RBP5.23□□□□□ -1.57
CLCN3-201ENST00000347613 FAM3AP98173 230 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 FOXO1Q12778 655 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 KRTAP27-1Q3LI81 207 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 IGSF11Q5DX21 431 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 LYZL2Q7Z4W2 148 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 VASH2Q86V25 355 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 GJC3Q8NFK1 279 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 OR5H2Q8NGV7 314 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 CPNE2Q96FN4 548 aaPredicted RBP5.23□□□□□ -1.57
CLCN3-201ENST00000347613 ULBP2Q9BZM5 246 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 NXT1Q9UKK6 140 aaKnown RBP5.23□□□□□ -1.57
CLCN3-201ENST00000347613 AMDHD2Q9Y303 409 aa5.23□□□□□ -1.57
CLCN3-201ENST00000347613 A0A0U1RQV5 110 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 KRBOX1C9JBD0 128 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 NPIPA2E9PIF3 369 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 NPIPA3F8WFD2 350 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 CNOT4O95628 575 aaKnown RBP5.22□□□□□ -1.57
CLCN3-201ENST00000347613 TMEM225BP0DP42 221 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 FPR2P25090 351 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 AKR1C3P42330 323 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 SSR4P51571 173 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 ZNF169Q14929 603 aaPredicted RBP5.22□□□□□ -1.57
CLCN3-201ENST00000347613 TGIF1Q15583 401 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 FAM27BQ5VT28 67 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 C20orf204Q6ZNR8 217 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 ODF3L1Q8IXM7 274 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 SLC30A7Q8NEW0 376 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 OR2Y1Q8NGV0 311 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 DUSP23Q9BVJ7 150 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 WDR54Q9H977 334 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 RCL1Q9Y2P8 373 aaKnown RBP5.22□□□□□ -1.57
CLCN3-201ENST00000347613 KNTC1P50748 2209 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 TTC28Q96AY4 2481 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 TMEM218A2RU14 115 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 ATXN7O15265 892 aaPredicted RBP5.22□□□□□ -1.57
CLCN3-201ENST00000347613 XRCC2O43543 280 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 LRP3O75074 770 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 DIRAS3O95661 229 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 CSTBP04080 98 aaKnown RBP5.22□□□□□ -1.57
CLCN3-201ENST00000347613 MUC1P15941 1255 aaPredicted RBP5.22□□□□□ -1.57
CLCN3-201ENST00000347613 THBS4P35443 961 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 GSK3AP49840 483 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 GRB2P62993 217 aaKnown RBP5.22□□□□□ -1.57
CLCN3-201ENST00000347613 CEACAM16Q2WEN9 425 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 PHLDA2Q53GA4 152 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 FAHD2BQ6P2I3 314 aaPredicted RBP5.22□□□□□ -1.57
CLCN3-201ENST00000347613 SULF2Q8IWU5 870 aa5.22□□□□□ -1.57
CLCN3-201ENST00000347613 TMEM156Q8N614 296 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms