RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 IGHV2-5P01817 119 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 GYPAP02724 150 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 OPN1MWP04001 364 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 OCMP0CE72 109 aaPredicted RBP6.58□□□□□ -1.36
CDC42-201ENST00000315554 DUX4L2P0CJ85 424 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 DUX4L3P0CJ86 424 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 DUX4L4P0CJ87 422 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 DUX4L5P0CJ88 424 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 DUX4L6P0CJ89 424 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 DUX4L7P0CJ90 424 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 OPN1MW2P0DN77 364 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 OPN1MW3P0DN78 364 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 CALCBP10092 127 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 ZNF12P17014 697 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 AZGP1P25311 298 aaKnown RBP6.58□□□□□ -1.36
CDC42-201ENST00000315554 MDH2P40926 338 aaKnown RBP6.58□□□□□ -1.36
CDC42-201ENST00000315554 POU3F4P49335 361 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 TAS2R43P59537 309 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 GABARAPL2P60520 117 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 RPS11P62280 158 aaKnown RBP eCLIP6.58□□□□□ -1.36
CDC42-201ENST00000315554 CNN3Q15417 329 aaKnown RBP6.58□□□□□ -1.36
CDC42-201ENST00000315554 ZNF181Q2M3W8 571 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 FAM76BQ5HYJ3 339 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 LIPKQ5VXJ0 399 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 ASPHD2Q6ICH7 369 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 C11orf88Q6PI97 169 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 DUX4L9Q6RFH8 374 aaPredicted RBP6.58□□□□□ -1.36
CDC42-201ENST00000315554 LRRC28Q86X40 367 aaPredicted RBP6.58□□□□□ -1.36
CDC42-201ENST00000315554 FAM90A1Q86YD7 464 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 CCDC54Q8NEL0 328 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 OR51A2Q8NGJ7 313 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 OR5D18Q8NGL1 313 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 HAVCR2Q8TDQ0 301 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 PP6455Q8WZ26 134 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 AQP3Q92482 292 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 TMEM203Q969S6 136 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 TMEM106AQ96A25 262 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 MSI2Q96DH6 328 aaKnown RBP6.58□□□□□ -1.36
CDC42-201ENST00000315554 BORCS8Q96FH0 119 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 OPALINQ96PE5 141 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 OR14A2Q96R54 314 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 ZCCHC4Q9H5U6 513 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 YAE1D1Q9NRH1 226 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 DUX4Q9UBX2 424 aa6.58□□□□□ -1.36
CDC42-201ENST00000315554 ZANQ9Y493 2812 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 MED13LQ71F56 2210 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 CSPG4Q6UVK1 2322 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 TRBV5-5A0A0J9YX44 114 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 OOEPA6NGQ2 149 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 J3QT63 122 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 SPRY1O43609 319 aaPredicted RBP6.57□□□□□ -1.36
CDC42-201ENST00000315554 ANGPTL7O43827 346 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 TGFAP01135 160 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 LHBP01229 141 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 S100A6P06703 90 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 HCKP08631 526 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 TMEM11P17152 192 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 SOX6P35712 828 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 FUT6P51993 359 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 RPS25P62851 125 aaKnown RBP6.57□□□□□ -1.36
CDC42-201ENST00000315554 LCN2P80188 198 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 CD83Q01151 205 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 EMX1Q04741 257 aaPredicted RBP6.57□□□□□ -1.36
CDC42-201ENST00000315554 BLMHQ13867 455 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 ZNF404Q494X3 552 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 Q499Y3 187 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 FAM27D1Q5T7N8 215 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 CYB5R2Q6BCY4 276 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 WDR73Q6P4I2 378 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 UTS2BQ765I0 119 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 BIVMQ86UB2 503 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 SATL1Q86VE3 508 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 SPARTQ8N0X7 666 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 FGFRL1Q8N441 504 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 SPICQ8N5J4 248 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 UFD1Q92890 307 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 SLAMF9Q96A28 289 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 CCL13Q99616 98 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 PATZ1Q9HBE1 687 aaKnown RBP6.57□□□□□ -1.36
CDC42-201ENST00000315554 ACOT13Q9NPJ3 140 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 DNAJB11Q9UBS4 358 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 ABCA2Q9BZC7 2435 aa6.57□□□□□ -1.36
CDC42-201ENST00000315554 TRAV8-7A0A075B6U6 113 aa6.56□□□□□ -1.36
CDC42-201ENST00000315554 TRBV23-1A0A0A0MS06 115 aa6.56□□□□□ -1.36
CDC42-201ENST00000315554 MAGEA13PA6NCF6 341 aa6.56□□□□□ -1.36
CDC42-201ENST00000315554 SRRM5B3KS81 715 aa6.56□□□□□ -1.36
CDC42-201ENST00000315554 ZNF879B4DU55 563 aa6.56□□□□□ -1.36
CDC42-201ENST00000315554 F8VVB4 439 aa6.56□□□□□ -1.36
CDC42-201ENST00000315554 F8VWA3 439 aa6.56□□□□□ -1.36
CDC42-201ENST00000315554 PIN1P1O15428 100 aa6.56□□□□□ -1.36
CDC42-201ENST00000315554 PHF1O43189 567 aaPredicted RBP6.56□□□□□ -1.36
CDC42-201ENST00000315554 ADAM20O43506 726 aa6.56□□□□□ -1.36
CDC42-201ENST00000315554 PLPP2O43688 288 aa6.56□□□□□ -1.36
CDC42-201ENST00000315554 SULT1B1O43704 296 aa6.56□□□□□ -1.36
CDC42-201ENST00000315554 CD5LO43866 347 aa6.56□□□□□ -1.36
CDC42-201ENST00000315554 CD2P06729 351 aa6.56□□□□□ -1.36
CDC42-201ENST00000315554 SELLP14151 372 aa6.56□□□□□ -1.36
CDC42-201ENST00000315554 RAB3AP20336 220 aa6.56□□□□□ -1.36
CDC42-201ENST00000315554 PRKACBP22694 351 aa6.56□□□□□ -1.36
CDC42-201ENST00000315554 GLRA1P23415 457 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms