RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 PYDC1Q8WXC3 89 aa15.94■□□□□ 0.14
LIME1-201ENST00000309546 RORBQ92753 470 aa15.94■□□□□ 0.14
LIME1-201ENST00000309546 EME1Q96AY2 570 aa15.94■□□□□ 0.14
LIME1-201ENST00000309546 CITED1Q99966 193 aa15.94■□□□□ 0.14
LIME1-201ENST00000309546 RBM4BQ9BQ04 359 aaKnown RBP15.94■□□□□ 0.14
LIME1-201ENST00000309546 OSBPL10Q9BXB5 764 aa15.94■□□□□ 0.14
LIME1-201ENST00000309546 GNG8Q9UK08 70 aa15.94■□□□□ 0.14
LIME1-201ENST00000309546 H3BUX3 64 aa15.93■□□□□ 0.14
LIME1-201ENST00000309546 NOS1APO75052 506 aaPredicted RBP15.93■□□□□ 0.14
LIME1-201ENST00000309546 INMTO95050 263 aa15.93■□□□□ 0.14
LIME1-201ENST00000309546 PIPP12273 146 aaPredicted RBP15.93■□□□□ 0.14
LIME1-201ENST00000309546 MPZP25189 248 aa15.93■□□□□ 0.14
LIME1-201ENST00000309546 KRTAP10-3P60369 221 aa15.93■□□□□ 0.14
LIME1-201ENST00000309546 CDC42P60953 191 aa15.93■□□□□ 0.14
LIME1-201ENST00000309546 TP53I3Q53FA7 332 aa15.93■□□□□ 0.14
LIME1-201ENST00000309546 Q6ZSR3 168 aa15.93■□□□□ 0.14
LIME1-201ENST00000309546 ZSCAN4Q8NAM6 433 aaPredicted RBP15.93■□□□□ 0.14
LIME1-201ENST00000309546 OR5R1Q8NH85 324 aa15.93■□□□□ 0.14
LIME1-201ENST00000309546 RFKQ969G6 155 aa15.93■□□□□ 0.14
LIME1-201ENST00000309546 HES4Q9HCC6 221 aa15.93■□□□□ 0.14
LIME1-201ENST00000309546 IMPAD1Q9NX62 359 aa15.93■□□□□ 0.14
LIME1-201ENST00000309546 CMYA5Q8N3K9 4069 aa15.93■□□□□ 0.14
LIME1-201ENST00000309546 LOC107986453A0A1B0GWG9 222 aa15.92■□□□□ 0.14
LIME1-201ENST00000309546 GATBO75879 557 aaKnown RBP15.92■□□□□ 0.14
LIME1-201ENST00000309546 SULT1C4O75897 302 aa15.92■□□□□ 0.14
LIME1-201ENST00000309546 CCL3L1P16619 93 aa15.92■□□□□ 0.14
LIME1-201ENST00000309546 COX7A1P24310 79 aa15.92■□□□□ 0.14
LIME1-201ENST00000309546 ZNF85Q03923 595 aa15.92■□□□□ 0.14
LIME1-201ENST00000309546 IL24Q13007 206 aa15.92■□□□□ 0.14
LIME1-201ENST00000309546 ZNF273Q14593 569 aa15.92■□□□□ 0.14
LIME1-201ENST00000309546 UBE2V2Q15819 145 aa15.92■□□□□ 0.14
LIME1-201ENST00000309546 TMEM200BQ69YZ2 307 aa15.92■□□□□ 0.14
LIME1-201ENST00000309546 ASCC1Q8N9N2 400 aaKnown RBP15.92■□□□□ 0.14
LIME1-201ENST00000309546 BEND2Q8NDZ0 799 aa15.92■□□□□ 0.14
LIME1-201ENST00000309546 PKIBQ9C010 78 aa15.92■□□□□ 0.14
LIME1-201ENST00000309546 PPA2Q9H2U2 334 aa15.92■□□□□ 0.14
LIME1-201ENST00000309546 USE1Q9NZ43 259 aa15.92■□□□□ 0.14
LIME1-201ENST00000309546 PKD1L1Q8TDX9 2849 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 TIMM23O14925 209 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 KCNAB3O43448 404 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 TK1P04183 234 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 PAX6P26367 422 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 TGFBR2P37173 567 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 PROK1P58294 105 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 COL10A1Q03692 680 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 TMED1Q13445 227 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 LY6EQ16553 131 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 MIDNQ504T8 468 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 PRSS35Q8N3Z0 413 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 SLAMF9Q96A28 289 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 BORCS8Q96FH0 119 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 SSX3Q99909 188 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 CHST5Q9GZS9 411 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 ORC6Q9Y5N6 252 aa15.91■□□□□ 0.14
LIME1-201ENST00000309546 IGKV1-27A0A075B6S5 117 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 hCG_1809904A0A1W2PP81 198 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 A0A1W2PPE2 198 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 A0A1W2PR64 198 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 A0A1W2PRV1 198 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 MEX3AA1L020 520 aaKnown RBP15.9■□□□□ 0.14
LIME1-201ENST00000309546 M0QZ24 198 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 EI24O14681 340 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 CLPXO76031 633 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 UBCP0CG48 685 aaKnown RBP15.9■□□□□ 0.14
LIME1-201ENST00000309546 KIR3DL2P43630 455 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 BMXP51813 675 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 FUT6P51993 359 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 ERVFRD-1P60508 538 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 ERVK11-1P61568 191 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 ZNF782Q6ZMW2 699 aaPredicted RBP15.9■□□□□ 0.14
LIME1-201ENST00000309546 RDH10Q8IZV5 341 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 UBE2FQ969M7 185 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 CEP19Q96LK0 163 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 FAM234AQ9H0X4 552 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 HEXA-AS1Q9H8Q6 139 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 TCF7L1Q9HCS4 588 aa15.9■□□□□ 0.14
LIME1-201ENST00000309546 F8VVB4 439 aa15.89■□□□□ 0.13
LIME1-201ENST00000309546 F8VWA3 439 aa15.89■□□□□ 0.13
LIME1-201ENST00000309546 ENTPD6O75354 484 aa15.89■□□□□ 0.13
LIME1-201ENST00000309546 SERPINA3P01011 423 aa15.89■□□□□ 0.13
LIME1-201ENST00000309546 EDDM3BP56851 147 aa15.89■□□□□ 0.13
LIME1-201ENST00000309546 CNN3Q15417 329 aaKnown RBP15.89■□□□□ 0.13
LIME1-201ENST00000309546 LRRC75BQ2VPJ9 315 aa15.89■□□□□ 0.13
LIME1-201ENST00000309546 ZIK1Q3SY52 487 aaPredicted RBP15.89■□□□□ 0.13
LIME1-201ENST00000309546 SLC25A26Q70HW3 274 aa15.89■□□□□ 0.13
LIME1-201ENST00000309546 CCDC54Q8NEL0 328 aa15.89■□□□□ 0.13
LIME1-201ENST00000309546 RNFT2Q96EX2 444 aa15.89■□□□□ 0.13
LIME1-201ENST00000309546 C16orf95Q9H693 158 aa15.89■□□□□ 0.13
LIME1-201ENST00000309546 MTCH1Q9NZJ7 389 aa15.89■□□□□ 0.13
LIME1-201ENST00000309546 DSCAML1Q8TD84 2053 aa15.88■□□□□ 0.13
LIME1-201ENST00000309546 K7N7A8 449 aa15.88■□□□□ 0.13
LIME1-201ENST00000309546 TSPAN9O75954 239 aa15.88■□□□□ 0.13
LIME1-201ENST00000309546 ALPLP05186 524 aa15.88■□□□□ 0.13
LIME1-201ENST00000309546 POU3F4P49335 361 aa15.88■□□□□ 0.13
LIME1-201ENST00000309546 LGALS4P56470 323 aa15.88■□□□□ 0.13
LIME1-201ENST00000309546 ISL1P61371 349 aa15.88■□□□□ 0.13
LIME1-201ENST00000309546 KPNB1Q14974 876 aaKnown RBP15.88■□□□□ 0.13
LIME1-201ENST00000309546 GDPD3Q7L5L3 318 aa15.88■□□□□ 0.13
LIME1-201ENST00000309546 C11orf42Q8N5U0 333 aa15.88■□□□□ 0.13
LIME1-201ENST00000309546 EMG1Q92979 244 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms