RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 TMPRSS9Q7Z410 1059 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 SCCPDHQ8NBX0 429 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 OR2G3Q8NGZ4 309 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 ZCCHC14Q8WYQ9 949 aaKnown RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 AKR1E2Q96JD6 320 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 NOL4LQ96MY1 436 aaPredicted RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 SH2D2AQ9NP31 389 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 KCNIP2Q9NS61 270 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 COA4Q9NYJ1 87 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 TREM2Q9NZC2 230 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 KIAA1456Q9P272 454 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 FBXL17Q9UF56 701 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 FAM96BQ9Y3D0 163 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 PUS1Q9Y606 427 aaKnown RBP eCLIP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 C2orf72A6NCS6 295 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 IDSB3KWA1 339 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 PTBP3O95758 552 aaKnown RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 THEGLP0DJG4 465 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 PVRP15151 417 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 MUC1P15941 1255 aaPredicted RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 MSR1P21757 451 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 MELKQ14680 651 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 ACOT6Q3I5F7 207 aaPredicted RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 SPIN3Q5JUX0 258 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 TIPARPQ7Z3E1 657 aaKnown RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 DPPA2Q7Z7J5 298 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 DTX1Q86Y01 620 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF321PQ8N8H1 164 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 NOXO1Q8NFA2 376 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 ASB10Q8WXI3 467 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 C1QTNF6Q9BXI9 259 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 CNTD2Q9H8S5 307 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 V9GYS6 101 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF729A6NN14 1252 aaPredicted RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 CEACAM18A8MTB9 384 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 TMEM14DPA8MWL7 114 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 CLDN34H7C241 214 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 PRRG2O14669 202 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 ZFAND5O76080 213 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 CNOT4O95628 575 aaKnown RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 NME1P15531 152 aaKnown RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 GNB3P16520 340 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 RCC1P18754 421 aaPredicted RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 BIDP55957 195 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 NDUFA6P56556 154 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 STARD6P59095 220 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 DCDP81605 110 aaKnown RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 IL24Q13007 206 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 MSMO1Q15800 293 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 KHDC3LQ587J8 217 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 PEAR1Q5VY43 1037 aaPredicted RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 SLC35E3Q7Z769 313 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 TMEFF1Q8IYR6 380 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 POC1AQ8NBT0 407 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 SLC26A10Q8NG04 563 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 M1APQ8TC57 530 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF2Q9BSG1 426 aaPredicted RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 MIOXQ9UGB7 285 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 ARID1BQ8NFD5 2236 aaPredicted RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 A0A1W2PPC4 97 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 ALOX12BO75342 701 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 DEDDO75618 318 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 HLA-HP01893 362 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 HSPB1P04792 205 aaKnown RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 GLAP06280 429 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF735P0CB33 412 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 TMIGD3P0DMS9 266 aaPredicted RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 OR5H8P0DN80 308 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 PRF1P14222 555 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 CCKARP32238 428 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 SULT1A1P50225 295 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 EFNB2P52799 333 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 UCP3P55916 312 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 RPP30P78346 268 aaKnown RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 SRYQ05066 204 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 KRTAP27-1Q3LI81 207 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 ZFP82Q8N141 532 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 HAS2Q92819 552 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 MOGAT1Q96PD6 335 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 DMRTA2Q96SC8 542 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 TGIF2Q9GZN2 237 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 TLNRD1Q9H1K6 362 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 PLK3Q9H4B4 646 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 ZNF442Q9H7R0 627 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 MRPL22Q9NWU5 206 aaKnown RBP3.66□□□□□ -1.82
UBE4A-201ENST00000252108 AK3Q9UIJ7 227 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 WASF3Q9UPY6 502 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 PIAS3Q9Y6X2 628 aa3.66□□□□□ -1.82
UBE4A-201ENST00000252108 TRAV20A0A0B4J274 112 aa3.65□□□□□ -1.82
UBE4A-201ENST00000252108 IGHV1OR15-9A0A0B4J2B8 117 aa3.65□□□□□ -1.82
UBE4A-201ENST00000252108 H3BSH0 61 aa3.65□□□□□ -1.82
UBE4A-201ENST00000252108 M0QZK8 103 aa3.65□□□□□ -1.82
UBE4A-201ENST00000252108 GGCTO75223 188 aaKnown RBP3.65□□□□□ -1.82
UBE4A-201ENST00000252108 VSIG8P0DPA2 414 aa3.65□□□□□ -1.82
UBE4A-201ENST00000252108 FCGR2AP12318 317 aa3.65□□□□□ -1.82
UBE4A-201ENST00000252108 FOLR1P15328 257 aa3.65□□□□□ -1.82
UBE4A-201ENST00000252108 CDX1P47902 265 aaPredicted RBP3.65□□□□□ -1.82
UBE4A-201ENST00000252108 AKR1C2P52895 323 aa3.65□□□□□ -1.82
UBE4A-201ENST00000252108 CEBPGP53567 150 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms