RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Syt9Q9R0N9 491 aa19.84■□□□□ 0.77
Scn1b-201ENSMUST00000098548 NgfrQ9Z0W1 417 aa19.84■□□□□ 0.77
Scn1b-201ENSMUST00000098548 Gm17087V9GXQ2 156 aa19.84■□□□□ 0.77
Scn1b-201ENSMUST00000098548 Slco5a1E9PVD9 850 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 Gm20834J3QM72 227 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 Gm6401L7N2C0 213 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 Olfr329-psM9MMK4 331 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 ColqO35348 457 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 P06344 263 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 PtcraP0C6B2 199 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 NodalP43021 354 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 Hist1h3aP68433 136 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 Stx4P70452 298 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 Hist1h3bP84228 136 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 Ppp5cQ60676 499 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 GfralQ6SJE0 393 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 Fam117aQ7TNF9 451 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 Tas2r3Q7TQA7 316 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 Vmn1r228Q8R2A7 333 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 Mfsd6lQ8R3N2 586 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 Cadm3Q99N28 396 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 Dnajc4Q9D844 244 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 GltpQ9JL62 209 aa19.83■□□□□ 0.77
Scn1b-201ENSMUST00000098548 Glb1l3A2RSQ1 649 aa19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Vmn1r68E9Q0V3 319 aa19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Selenbp1P17563 472 aa19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Pla2g2aP31482 146 aa19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 SgcbP82349 320 aa19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Pip4p1Q3TWL2 284 aa19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Hormad2Q5SQP1 306 aa19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Olfr1113Q7TR54 326 aa19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Negr1Q80Z24 348 aa19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Oxa1lQ8BGA9 433 aa19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Tnfsfm13Q8BXS2 410 aa19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Olfr1094Q8VF13 330 aa19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Olfr994Q8VF73 314 aa19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Tmem216Q9CQC4 141 aa19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Mrpl21Q9D1N9 209 aaKnown RBP19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Tnfrsf19Q9JLL3 416 aa19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Ccr9Q9WUT7 369 aa19.83■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Zfp334A2A4U6 679 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Ndufaf5A2APY7 343 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Olfr420E9Q4G0 321 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Olfr173E9QAT7 321 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Vmn1r121K7N6J4 314 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Zfp2P08043 459 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Adra2aQ01338 450 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Srek1ip1Q4V9W2 153 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Pon3Q62087 354 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Tm7sf2Q71KT5 418 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Olfr804Q7TRH7 314 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Klf11Q8K1S5 502 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Rnf121Q8R1Z9 327 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 SptssaQ8R207 71 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Olfr120Q8VFQ2 330 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 NifkQ91VE6 317 aaKnown RBP19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Rnps1Q99M28 305 aaKnown RBP19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Myo7bQ99MZ6 2113 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Mrps16Q9CPX7 135 aaKnown RBP19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Washc3Q9CR27 194 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Tmem175Q9CXY1 499 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Mbd3l1Q9D9H3 186 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Dnajb12Q9QYI4 376 aaKnown RBP19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Orc6Q9WUJ8 262 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Asah1Q9WV54 394 aa19.82■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Gm28897A0A087WP44 222 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Vmn2r30K7N5W1 852 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Cacng2O88602 323 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Camk2bP28652 542 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 A4gntQ14BT6 341 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Them4Q3UUI3 230 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Zfp974Q3UVF6 752 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Dyrk1aQ61214 763 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Rab35Q6PHN9 201 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Tas2r113Q7M711 309 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Olfr1014Q7TR95 305 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Olfr1013Q7TR96 305 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 ApehQ8R146 732 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Chrnb4Q8R493 495 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Ccdc115Q8VE99 180 aaKnown RBP19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Olfr518Q8VEW1 333 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Olfr1122Q8VGT9 326 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Thyn1Q91YJ3 226 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Jmjd1cQ69ZK6 2350 aa19.81■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Tex38A2A8T7 201 aa19.8■□□□□ 0.76
Scn1b-201ENSMUST00000098548 RbpjP31266 526 aa19.8■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Olfr1428Q0VDY1 314 aa19.8■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Defb33Q30KN3 62 aa19.8■□□□□ 0.76
Scn1b-201ENSMUST00000098548 NmsQ5H8A1 153 aa19.8■□□□□ 0.76
Scn1b-201ENSMUST00000098548 TefmQ5SSK3 364 aaKnown RBP19.8■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Slc17a1Q61983 465 aa19.8■□□□□ 0.76
Scn1b-201ENSMUST00000098548 NdnfQ8C119 568 aa19.8■□□□□ 0.76
Scn1b-201ENSMUST00000098548 GnalQ8CGK7 381 aa19.8■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Dhrs7cQ8CHS7 311 aa19.8■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Olfr54Q8VFE6 313 aa19.8■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Pla1aQ8VI78 456 aa19.8■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Paip2bQ91W45 136 aa19.8■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Ripply3Q924S9 152 aa19.8■□□□□ 0.76
Scn1b-201ENSMUST00000098548 SdhcQ9CZB0 169 aaKnown RBP19.8■□□□□ 0.76
Scn1b-201ENSMUST00000098548 Kcnmb4Q9JIN6 210 aa19.8■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms