RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 HLA-GP17693 338 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 RGRP47804 291 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 MMP16P51512 607 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 HNRNPA1L2Q32P51 320 aaKnown RBP9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 UBALD2Q8IYN6 164 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 ROBO4Q8WZ75 1007 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 DERL1Q9BUN8 251 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 SLC7A10Q9NS82 523 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 GNG7O60262 68 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 GDF1P27539 372 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 RPS27P42677 84 aaKnown RBP9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 CCL14Q16627 93 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 PRTGQ2VWP7 1150 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 H1FNTQ75WM6 255 aaPredicted RBP9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 PLXDC1Q8IUK5 500 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 ZNF595Q8IYB9 648 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 TRMT61AQ96FX7 289 aaKnown RBP9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 XRN1Q8IZH2 1706 aaKnown RBP9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 HEPACAM2A8MVW5 462 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 TMPRSS11DO60235 418 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 HFEQ30201 348 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 OR6C1Q96RD1 312 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 PMS2P1A4D2B8 440 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 TM4SF4P48230 202 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 CSNK1DP48730 415 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 RIPPLY3P57055 190 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 RHOBP62745 196 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 KLF9Q13886 244 aaPredicted RBP9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 RTL8BQ17RB0 113 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 RNF165Q6ZSG1 346 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 MRGPRGQ86SM5 289 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 SMDT1Q9H4I9 107 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 PRR13Q9NZ81 148 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 NEU3Q9UQ49 428 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 CAMTA1Q9Y6Y1 1673 aa9.79□□□□□ -0.84
KCNMA1-259ENST00000639406 TMEM238LA0A1B0GVL6 79 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 A6NJY4 79 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 HCRTR1O43613 425 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 PDE6DO43924 150 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 GRPP07492 148 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 MELTFP08582 738 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 ZBTB25P24278 435 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 FUT7Q11130 342 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 CST6Q15828 149 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 ZNF506Q5JVG8 444 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 C10orf126Q8N4M7 172 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 CPEB1Q9BZB8 566 aaKnown RBP9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 C20orf141Q9NUB4 165 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 LRRC3CA6NJW4 275 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 TRGC1P0CF51 173 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 MYOGP15173 224 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 GCSHP23434 173 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 THBS4P35443 961 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 SCAND1P57086 179 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 KCNAB1Q14722 419 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 ZNF660Q6AZW8 331 aaPredicted RBP9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 SHISA6Q6ZSJ9 500 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 ZNF740Q8NDX6 193 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 ZCCHC14Q8WYQ9 949 aaKnown RBP9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 RDH5Q92781 318 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 TLNRD1Q9H1K6 362 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 MBNL1Q9NR56 388 aaKnown RBP9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 TMEM140Q9NV12 185 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 NALCNQ8IZF0 1738 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 PEAK1Q9H792 1746 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 SH2D1BO14796 132 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 EPHA8P29322 1005 aaPredicted RBP9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 DUSP5Q16690 384 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 PARM1Q6UWI2 310 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 WIPI2Q9Y4P8 454 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 CLDN16Q9Y5I7 305 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 IFT172Q9UG01 1749 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 LMX1BO60663 402 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 EIF1BO60739 113 aaKnown RBP9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 SOD2P04179 222 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 SEC11BP0C7V7 166 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 AREGP15514 252 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 HOXA6P31267 233 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 EIF1P41567 113 aaKnown RBP9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 HSF5Q4G112 596 aaPredicted RBP9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 VHLLQ6RSH7 139 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 CLEC18BQ6UXF7 455 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 NUDT10Q8NFP7 164 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 OR10S1Q8NGN2 331 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 ADTRPQ96IZ2 230 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 TECRQ9NZ01 308 aaKnown RBP9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 ZMIZ1Q9ULJ6 1067 aa9.78□□□□□ -0.84
KCNMA1-259ENST00000639406 OR8B8Q15620 311 aa9.77□□□□□ -0.84
KCNMA1-259ENST00000639406 KHDC3LQ587J8 217 aa9.77□□□□□ -0.84
KCNMA1-259ENST00000639406 CALHM3Q86XJ0 350 aa9.77□□□□□ -0.84
KCNMA1-259ENST00000639406 OSR2Q8N2R0 312 aa9.77□□□□□ -0.84
KCNMA1-259ENST00000639406 OR52N5Q8NH56 324 aa9.77□□□□□ -0.84
KCNMA1-259ENST00000639406 RTL8AQ9BWD3 113 aa9.77□□□□□ -0.84
KCNMA1-259ENST00000639406 ST3GAL6Q9Y274 331 aa9.77□□□□□ -0.84
KCNMA1-259ENST00000639406 C7orf66A4D0T2 115 aa9.77□□□□□ -0.85
KCNMA1-259ENST00000639406 OR2T8A6NH00 312 aa9.77□□□□□ -0.85
KCNMA1-259ENST00000639406 PRAMEF20Q5VT98 475 aa9.77□□□□□ -0.85
KCNMA1-259ENST00000639406 TMEM64Q6YI46 380 aa9.77□□□□□ -0.85
KCNMA1-259ENST00000639406 CYB561D1Q8N8Q1 229 aa9.77□□□□□ -0.85
KCNMA1-259ENST00000639406 NUDT11Q96G61 164 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms