RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 CSAG2Q9Y5P2 127 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 FLVCR1Q9Y5Y0 555 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 CEP250Q9BV73 2442 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 CELSR3Q9NYQ7 3312 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 ARGFXA6NJG6 315 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 SERPINE3A8MV23 424 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 APOC1P02654 83 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 SUPT4H1P63272 117 aaKnown RBP12.84□□□□□ -0.35
CDH1-213ENST00000612417 PPA1Q15181 289 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 RSPO1Q2MKA7 263 aaPredicted RBP12.84□□□□□ -0.35
CDH1-213ENST00000612417 AADACL3Q5VUY0 350 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 UQCC3Q6UW78 93 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 CLEC18BQ6UXF7 455 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 CCDC36Q8IYA8 594 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 OR51T1Q8NGJ9 327 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 OR13G1Q8NGZ3 307 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 PIGQQ9BRB3 760 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 RTBDNQ9BSG5 229 aaPredicted RBP12.84□□□□□ -0.35
CDH1-213ENST00000612417 NAA11Q9BSU3 229 aaPredicted RBP12.84□□□□□ -0.35
CDH1-213ENST00000612417 RNF126Q9BV68 326 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 DEPPQ9NTK1 212 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 TAS2R3Q9NYW6 316 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 RTTNQ86VV8 2226 aa12.83□□□□□ -0.35
CDH1-213ENST00000612417 TSPAN4O14817 238 aa12.83□□□□□ -0.36
CDH1-213ENST00000612417 FGF16O43320 207 aa12.83□□□□□ -0.36
CDH1-213ENST00000612417 DHHO43323 396 aa12.83□□□□□ -0.36
CDH1-213ENST00000612417 PGAM2P15259 253 aa12.83□□□□□ -0.36
CDH1-213ENST00000612417 SRD5A2P31213 254 aa12.83□□□□□ -0.36
CDH1-213ENST00000612417 CSNK2A1P68400 391 aaPredicted RBP12.83□□□□□ -0.36
CDH1-213ENST00000612417 SURF2Q15527 256 aaPredicted RBP12.83□□□□□ -0.36
CDH1-213ENST00000612417 UBE2V2Q15819 145 aa12.83□□□□□ -0.36
CDH1-213ENST00000612417 RTL6Q6ICC9 239 aa12.83□□□□□ -0.36
CDH1-213ENST00000612417 ASCL5Q7RTU5 278 aa12.83□□□□□ -0.36
CDH1-213ENST00000612417 C1QL2Q7Z5L3 287 aa12.83□□□□□ -0.36
CDH1-213ENST00000612417 ARL6IP6Q8N6S5 226 aa12.83□□□□□ -0.36
CDH1-213ENST00000612417 SLC30A7Q8NEW0 376 aa12.83□□□□□ -0.36
CDH1-213ENST00000612417 OR9K2Q8NGE7 335 aa12.83□□□□□ -0.36
CDH1-213ENST00000612417 SLC39A7Q92504 469 aa12.83□□□□□ -0.36
CDH1-213ENST00000612417 HAS2Q92819 552 aa12.83□□□□□ -0.36
CDH1-213ENST00000612417 ZNF385AQ96PM9 386 aaKnown RBP12.83□□□□□ -0.36
CDH1-213ENST00000612417 SIGLEC12Q96PQ1 595 aa12.83□□□□□ -0.36
CDH1-213ENST00000612417 C13orf42A0A1B0GVH6 325 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 RAB19A4D1S5 217 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 NPIPA2E9PIF3 369 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 NPIPA3F8WFD2 350 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 TM4SF5O14894 197 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 WDPCPO95876 746 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 RFPL3SP0C7P2 107 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 GDF1P27539 372 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 OR1C1Q15619 314 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 ELP2Q6IA86 826 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 DCUN1D4Q92564 292 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 PECRQ9BY49 303 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 OR5H15A6NDH6 313 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 DHRS7CA6NNS2 312 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 F5H5K5 113 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 HPNP05981 417 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 TPT1P13693 172 aaKnown RBP12.82□□□□□ -0.36
CDH1-213ENST00000612417 RPS2P15880 293 aaKnown RBP12.82□□□□□ -0.36
CDH1-213ENST00000612417 CPT2P23786 658 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 BLVRBP30043 206 aaPredicted RBP12.82□□□□□ -0.36
CDH1-213ENST00000612417 OR3A2P47893 321 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 SLC6A9P48067 706 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 SNU13P55769 128 aaKnown RBP12.82□□□□□ -0.36
CDH1-213ENST00000612417 TMPRSS7Q7RTY8 843 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 OR5D18Q8NGL1 313 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 SPOCK3Q9BQ16 436 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 TMEM100Q9NV29 134 aa12.82□□□□□ -0.36
CDH1-213ENST00000612417 BOKQ9UMX3 212 aaPredicted RBP12.82□□□□□ -0.36
CDH1-213ENST00000612417 PINLYPA6NC86 204 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 LRRC3CA6NJW4 275 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 FIGNL2A6NMB9 653 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 H0YIZ8 118 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 M0R135 149 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 DNPH1O43598 174 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 NEURL1O76050 574 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 APOC3P02656 99 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 FAHP16930 419 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 RAC1P63000 192 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 SRSF6Q13247 344 aaKnown RBP12.81□□□□□ -0.36
CDH1-213ENST00000612417 ANKRD55Q3KP44 614 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 PRSS54Q6PEW0 395 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 ZIC4Q8N9L1 334 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 ZSCAN4Q8NAM6 433 aaPredicted RBP12.81□□□□□ -0.36
CDH1-213ENST00000612417 CSNK2A3Q8NEV1 391 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 EMG1Q92979 244 aaKnown RBP12.81□□□□□ -0.36
CDH1-213ENST00000612417 MARC2Q969Z3 335 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 RRNAD1Q96FB5 475 aaKnown RBP12.81□□□□□ -0.36
CDH1-213ENST00000612417 ZNF799Q96GE5 643 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 CYYR1Q96J86 154 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 UCN2Q96RP3 112 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 FAM173AQ9BQD7 235 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 DLL3Q9NYJ7 618 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 PCDHB10Q9UN67 800 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 GJE1A6NN92 205 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 NKX2-8O15522 239 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 RFC3P40938 356 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 ZNF84P51523 738 aa12.81□□□□□ -0.36
CDH1-213ENST00000612417 MRPS34P82930 218 aaKnown RBP12.81□□□□□ -0.36
CDH1-213ENST00000612417 SLC9A3R2Q15599 337 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms