RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 APH1BQ8WW43 257 aa14.21□□□□□ -0.13
HERC3-214ENST00000601319 PP6455Q8WZ26 134 aa14.21□□□□□ -0.13
HERC3-214ENST00000601319 PELI1Q96FA3 418 aa14.21□□□□□ -0.13
HERC3-214ENST00000601319 TBX15Q96SF7 602 aa14.21□□□□□ -0.13
HERC3-214ENST00000601319 ADI1Q9BV57 179 aa14.21□□□□□ -0.13
HERC3-214ENST00000601319 PKIBQ9C010 78 aa14.21□□□□□ -0.13
HERC3-214ENST00000601319 MS4A7Q9GZW8 240 aaPredicted RBP14.21□□□□□ -0.13
HERC3-214ENST00000601319 AASSQ9UDR5 926 aa14.21□□□□□ -0.13
HERC3-214ENST00000601319 KPTNQ9Y664 436 aa14.21□□□□□ -0.13
HERC3-214ENST00000601319 DSCAML1Q8TD84 2053 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 IGKV1D-17A0A075B6S4 117 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 TOX4O94842 621 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 CAV3P56539 151 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 OR12D2P58182 307 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 GMFBP60983 142 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 GALEQ14376 348 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 PDCD1Q15116 288 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 DMRTC1Q5HYR2 192 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 GPR157Q5UAW9 335 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 TMEM244Q5VVB8 128 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 LPCAT4Q643R3 524 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 BCL6BQ8N143 479 aaPredicted RBP14.2□□□□□ -0.14
HERC3-214ENST00000601319 FGFRL1Q8N441 504 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 ZNF555Q8NEP9 628 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 SDSLQ96GA7 329 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 C4orf36Q96KX1 117 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 NRIP2Q9BQI9 281 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 PCGF1Q9BSM1 259 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 DCTN5Q9BTE1 182 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 JAM3Q9BX67 310 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 SNTG1Q9NSN8 517 aa14.2□□□□□ -0.14
HERC3-214ENST00000601319 RPL36Q9Y3U8 105 aaKnown RBP14.2□□□□□ -0.14
HERC3-214ENST00000601319 SFTPBP07988 381 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 HTR1AP08908 422 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 PSG2P11465 335 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 SELLP14151 372 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 NANOS3P60323 173 aaKnown RBP14.19□□□□□ -0.14
HERC3-214ENST00000601319 UBA52P62987 128 aaKnown RBP14.19□□□□□ -0.14
HERC3-214ENST00000601319 IL24Q13007 206 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 MRPL28Q13084 256 aaKnown RBP14.19□□□□□ -0.14
HERC3-214ENST00000601319 IKZF1Q13422 519 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 RCN1Q15293 331 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 CNN3Q15417 329 aaKnown RBP14.19□□□□□ -0.14
HERC3-214ENST00000601319 UBE2V2Q15819 145 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 DGUOKQ16854 277 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 ACP7Q6ZNF0 438 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 HAVCR2Q8TDQ0 301 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 ZNF48Q96MX3 618 aaPredicted RBP14.19□□□□□ -0.14
HERC3-214ENST00000601319 ZNF649Q9BS31 505 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 ALG8Q9BVK2 526 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 PRDM13Q9H4Q3 707 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 HES4Q9HCC6 221 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 FRRS1LQ9P0K9 344 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 SLC25A10Q9UBX3 287 aaPredicted RBP14.19□□□□□ -0.14
HERC3-214ENST00000601319 SLC7A11Q9UPY5 501 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 MYRFQ9Y2G1 1151 aa14.19□□□□□ -0.14
HERC3-214ENST00000601319 DNAJC9-AS1A6NH13 148 aa14.18□□□□□ -0.14
HERC3-214ENST00000601319 A6NIN4 97 aa14.18□□□□□ -0.14
HERC3-214ENST00000601319 CLDN34H7C241 214 aa14.18□□□□□ -0.14
HERC3-214ENST00000601319 SYNGR1O43759 233 aa14.18□□□□□ -0.14
HERC3-214ENST00000601319 WBP4O75554 376 aaKnown RBP14.18□□□□□ -0.14
HERC3-214ENST00000601319 RPSAP08865 295 aaKnown RBP14.18□□□□□ -0.14
HERC3-214ENST00000601319 KLHL22Q53GT1 634 aa14.18□□□□□ -0.14
HERC3-214ENST00000601319 UTS2BQ765I0 119 aa14.18□□□□□ -0.14
HERC3-214ENST00000601319 CALHM1Q8IU99 346 aa14.18□□□□□ -0.14
HERC3-214ENST00000601319 DNAAF1Q8NEP3 725 aa14.18□□□□□ -0.14
HERC3-214ENST00000601319 CNTD2Q9H8S5 307 aa14.18□□□□□ -0.14
HERC3-214ENST00000601319 ERVK13-1Q9NX77 482 aa14.18□□□□□ -0.14
HERC3-214ENST00000601319 IGHV3OR16-10A0A075B7F0 116 aa14.17□□□□□ -0.14
HERC3-214ENST00000601319 TRBV23-1A0A0A0MS06 115 aa14.17□□□□□ -0.14
HERC3-214ENST00000601319 OR4C45A6NMZ5 311 aa14.17□□□□□ -0.14
HERC3-214ENST00000601319 J3QLW9 94 aa14.17□□□□□ -0.14
HERC3-214ENST00000601319 SERPINA3P01011 423 aa14.17□□□□□ -0.14
HERC3-214ENST00000601319 ZNF19P17023 458 aa14.17□□□□□ -0.14
HERC3-214ENST00000601319 PRTN3P24158 256 aa14.17□□□□□ -0.14
HERC3-214ENST00000601319 PEX2P28328 305 aa14.17□□□□□ -0.14
HERC3-214ENST00000601319 COMPP49747 757 aaPredicted RBP14.17□□□□□ -0.14
HERC3-214ENST00000601319 FUT6P51993 359 aa14.17□□□□□ -0.14
HERC3-214ENST00000601319 ERVK11-1P61568 191 aa14.17□□□□□ -0.14
HERC3-214ENST00000601319 ZNF691Q5VV52 312 aa14.17□□□□□ -0.14
HERC3-214ENST00000601319 CMTM4Q8IZR5 234 aa14.17□□□□□ -0.14
HERC3-214ENST00000601319 OR52I1Q8NGK6 324 aa14.17□□□□□ -0.14
HERC3-214ENST00000601319 C1orf147Q96MC9 270 aaPredicted RBP14.17□□□□□ -0.14
HERC3-214ENST00000601319 AMBNQ9NP70 447 aa14.17□□□□□ -0.14
HERC3-214ENST00000601319 FGF20Q9NP95 211 aaPredicted RBP14.17□□□□□ -0.14
HERC3-214ENST00000601319 HHLA2Q9UM44 414 aa14.17□□□□□ -0.14
HERC3-214ENST00000601319 MAB21L2Q9Y586 359 aa14.17□□□□□ -0.14
HERC3-214ENST00000601319 CENPVL3A0A0U1RRI6 287 aa14.16□□□□□ -0.14
HERC3-214ENST00000601319 H3BSH0 61 aa14.16□□□□□ -0.14
HERC3-214ENST00000601319 CASQ2O14958 399 aaPredicted RBP14.16□□□□□ -0.14
HERC3-214ENST00000601319 NXPH2O95156 264 aa14.16□□□□□ -0.14
HERC3-214ENST00000601319 TFF1P04155 84 aa14.16□□□□□ -0.14
HERC3-214ENST00000601319 GABRA2P47869 451 aa14.16□□□□□ -0.14
HERC3-214ENST00000601319 ARF6P62330 175 aa14.16□□□□□ -0.14
HERC3-214ENST00000601319 ACTG1P63261 375 aa14.16□□□□□ -0.14
HERC3-214ENST00000601319 ALKBH1Q13686 389 aaKnown RBP14.16□□□□□ -0.14
HERC3-214ENST00000601319 TTC23Q5W5X9 447 aa14.16□□□□□ -0.14
HERC3-214ENST00000601319 METAP1DQ6UB28 335 aaPredicted RBP14.16□□□□□ -0.14
HERC3-214ENST00000601319 BRD3OSQ6XYD6 125 aa14.16□□□□□ -0.14
HERC3-214ENST00000601319 LHFPL3Q86UP9 236 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms