RNA–Protein interactions for RNA: ENST00000601253.5

SNRPA-209, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 519 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-209ENST00000601253 C19orf18Q8NEA5 215 aa11.54□□□□□ -0.56
SNRPA-209ENST00000601253 TRMT10AQ8TBZ6 339 aaKnown RBP11.54□□□□□ -0.56
SNRPA-209ENST00000601253 NPRL2Q8WTW4 380 aa11.54□□□□□ -0.56
SNRPA-209ENST00000601253 SGCDQ92629 289 aa11.54□□□□□ -0.56
SNRPA-209ENST00000601253 THRSPQ92748 146 aa11.54□□□□□ -0.56
SNRPA-209ENST00000601253 PGLYRP3Q96LB9 341 aa11.54□□□□□ -0.56
SNRPA-209ENST00000601253 YTHDF1Q9BYJ9 559 aaKnown RBP11.54□□□□□ -0.56
SNRPA-209ENST00000601253 DNTTIP1Q9H147 329 aa11.54□□□□□ -0.56
SNRPA-209ENST00000601253 HIF1ANQ9NWT6 349 aa11.54□□□□□ -0.56
SNRPA-209ENST00000601253 KAAG1Q9UBP8 84 aa11.54□□□□□ -0.56
SNRPA-209ENST00000601253 DNAJB11Q9UBS4 358 aa11.54□□□□□ -0.56
SNRPA-209ENST00000601253 LSM2Q9Y333 95 aaKnown RBP11.54□□□□□ -0.56
SNRPA-209ENST00000601253 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.53□□□□□ -0.561e-10■■■■□ 22.4
SNRPA-209ENST00000601253 INAFM1C9JVW0 142 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 AKR7A2O43488 359 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 SULT1B1O43704 296 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 MRPS14O60783 128 aaKnown RBP11.53□□□□□ -0.56
SNRPA-209ENST00000601253 PGA5P0DJD9 388 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 CELP19835 753 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 GLRA1P23415 457 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 EEF1B2P24534 225 aaKnown RBP11.53□□□□□ -0.56
SNRPA-209ENST00000601253 PITPNBP48739 271 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 NPY4RP50391 375 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 MTCP1P56278 107 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 GABARAPL2P60520 117 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 HOXA4Q00056 320 aaPredicted RBP11.53□□□□□ -0.56
SNRPA-209ENST00000601253 ZFP41Q8N8Y5 198 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 OR13C9Q8NGT0 318 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 TMIGD2Q96BF3 282 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 CPNE2Q96FN4 548 aaPredicted RBP11.53□□□□□ -0.56
SNRPA-209ENST00000601253 OPALINQ96PE5 141 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 NRIP2Q9BQI9 281 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 SSBP3Q9BWW4 388 aaPredicted RBP11.53□□□□□ -0.56
SNRPA-209ENST00000601253 CCDC90BQ9GZT6 254 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 LPAR2Q9HBW0 351 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 LPAR3Q9UBY5 353 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 OR5V1Q9UGF6 321 aa11.53□□□□□ -0.56
SNRPA-209ENST00000601253 YLPM1P49750 1951 aaKnown RBP11.53□□□□□ -0.56
SNRPA-209ENST00000601253 ABCA2Q9BZC7 2435 aa11.52□□□□□ -0.56
SNRPA-209ENST00000601253 IGKV1-27A0A075B6S5 117 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 IGHV3OR15-7A0A075B7D8 119 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 A0A0G2JMP0 313 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 TRBV5-5A0A0J9YX44 114 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 A0A0X1KG70 313 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 ADAM20O43506 726 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 SYNGR1O43759 233 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 GYPAP02724 150 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 HNF1AP20823 631 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 SOX2P48431 317 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 GNB2P62879 340 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 LCN2P80188 198 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 GPR50Q13585 617 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 MED22Q15528 200 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 TBCEQ15813 527 aaPredicted RBP11.52□□□□□ -0.57
SNRPA-209ENST00000601253 SMIM21Q3B7S5 101 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 C11orf91Q3C1V1 193 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 Q499Y3 187 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 ATPAF1Q5TC12 328 aaPredicted RBP11.52□□□□□ -0.57
SNRPA-209ENST00000601253 STUMQ69YW2 141 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 ZNF529Q6P280 563 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 LYPD2Q6UXB3 125 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 SLC36A1Q7Z2H8 476 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 ANGPTL5Q86XS5 388 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 CALHM1Q8IU99 346 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 OR4M2Q8NGB6 313 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 TMEM106AQ96A25 262 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 WDR13Q9H1Z4 485 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 ISYNA1Q9NPH2 558 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 NLKQ9UBE8 527 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 CLN8Q9UBY8 286 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 CDC42EP3Q9UKI2 254 aa11.52□□□□□ -0.57
SNRPA-209ENST00000601253 NKX6-3A6NJ46 265 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 OR2AT4A6NND4 320 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 KIAA1324LA8MWY0 1029 aaPredicted RBP11.51□□□□□ -0.57
SNRPA-209ENST00000601253 J3QLI3 93 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 CYB5AP00167 134 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 RAB3AP20336 220 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 ZFP36P26651 326 aaKnown RBP11.51□□□□□ -0.57
SNRPA-209ENST00000601253 GMFBP60983 142 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 ERVK11-1P61568 191 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 SEC61A1P61619 476 aaKnown RBP11.51□□□□□ -0.57
SNRPA-209ENST00000601253 RPS11P62280 158 aaKnown RBP eCLIP11.51□□□□□ -0.57
SNRPA-209ENST00000601253 DOC2BQ14184 412 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 ZNF841Q6ZN19 808 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 ACP7Q6ZNF0 438 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 SLC25A26Q70HW3 274 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 MKXQ8IYA7 352 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 Q8IYB0 196 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 MS4A15Q8N5U1 240 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 TEX29Q8N6K0 151 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 ANGPTL6Q8NI99 470 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 CEP19Q96LK0 163 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 OR5M11Q96RB7 305 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 HES4Q9HCC6 221 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 CTSZQ9UBR2 303 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 CKLFQ9UBR5 152 aa11.51□□□□□ -0.57
SNRPA-209ENST00000601253 PNMA8CA0A1B0GUJ8 204 aa11.5□□□□□ -0.57
SNRPA-209ENST00000601253 TMPRSS2O15393 492 aa11.5□□□□□ -0.57
SNRPA-209ENST00000601253 MAGEB3O15480 346 aa11.5□□□□□ -0.57
SNRPA-209ENST00000601253 PHF1O43189 567 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms