RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	FGF23	Q9GZV9	251 aa	Predicted RBP	18.55	■□□□□ 0.56
LTBP4-227	ENST00000600026	IGHV1-69-2	A0A0G2JMI3	117 aa		18.54	■□□□□ 0.56
LTBP4-227	ENST00000600026	CDC14B	O60729	498 aa		18.54	■□□□□ 0.56
LTBP4-227	ENST00000600026	CLEC2L	P0C7M8	214 aa		18.54	■□□□□ 0.56
LTBP4-227	ENST00000600026	COL8A2	P25067	703 aa		18.54	■□□□□ 0.56
LTBP4-227	ENST00000600026	RPS19	P39019	145 aa	Known RBP	18.54	■□□□□ 0.56
LTBP4-227	ENST00000600026	HAAO	P46952	286 aa		18.54	■□□□□ 0.56
LTBP4-227	ENST00000600026	MRPS11	P82912	194 aa	Known RBP	18.54	■□□□□ 0.56
LTBP4-227	ENST00000600026	SPCS2	Q15005	226 aa		18.54	■□□□□ 0.56
LTBP4-227	ENST00000600026	UQCC2	Q9BRT2	126 aa		18.54	■□□□□ 0.56
LTBP4-227	ENST00000600026	PLGRKT	Q9HBL7	147 aa		18.54	■□□□□ 0.56
LTBP4-227	ENST00000600026	CACNG2	Q9Y698	323 aa		18.54	■□□□□ 0.56
LTBP4-227	ENST00000600026	IGKV1-27	A0A075B6S5	117 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	IGHV3-64D	A0A0J9YX35	117 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	LOC100289279	A0A1B0GTE1	492 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	NOTO	A8MTQ0	251 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	RP2	O75695	350 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	POU3F4	P49335	361 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	DSCR9	P59020	149 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	FAM76B	Q5HYJ3	339 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	PRAMEF6	Q5VXH4	476 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	CROCCP3	Q8IVE0	287 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	C10orf105	Q8TEF2	133 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	FAM168A	Q92567	244 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	ERGIC1	Q969X5	290 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	RFT1	Q96AA3	541 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	GFI1	Q99684	422 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	OR51I2	Q9H344	312 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	FN3KRP	Q9HA64	309 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	TREM2	Q9NZC2	230 aa		18.53	■□□□□ 0.56
LTBP4-227	ENST00000600026	F8	P00451	2351 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	IGHV4-30-2	A0A087WSY4	118 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	SMIM30	A4D0T7	59 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026		A6NLC8	198 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	PTBP3	O95758	552 aa	Known RBP	18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	CYB5A	P00167	134 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	GATA4	P43694	442 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	OR10A3	P58181	314 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	ZNF154	Q13106	437 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	HNRNPA0	Q13151	305 aa	Known RBP	18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	C1orf100	Q5SVJ3	147 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	HAGHL	Q6PII5	290 aa	Predicted RBP	18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	WDR86	Q86TI4	376 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	ANGPTL5	Q86XS5	388 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	TGIF2LY	Q8IUE0	185 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	MKX	Q8IYA7	352 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	SCCPDH	Q8NBX0	429 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	S100A13	Q99584	98 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	PKIB	Q9C010	78 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	CHODL	Q9H9P2	273 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026	DLL4	Q9NR61	685 aa		18.52	■□□□□ 0.56
LTBP4-227	ENST00000600026		J3QT63	122 aa		18.51	■□□□□ 0.55
LTBP4-227	ENST00000600026	SLC17A2	O00624	439 aa		18.51	■□□□□ 0.55
LTBP4-227	ENST00000600026	TMEM225B	P0DP42	221 aa		18.51	■□□□□ 0.55
LTBP4-227	ENST00000600026	CD37	P11049	281 aa		18.51	■□□□□ 0.55
LTBP4-227	ENST00000600026	HTR2C	P28335	458 aa		18.51	■□□□□ 0.55
LTBP4-227	ENST00000600026	RIN1	Q13671	783 aa		18.51	■□□□□ 0.55
LTBP4-227	ENST00000600026	FOXB2	Q5VYV0	432 aa		18.51	■□□□□ 0.55
LTBP4-227	ENST00000600026	SFXN4	Q6P4A7	337 aa		18.51	■□□□□ 0.55
LTBP4-227	ENST00000600026	MOGAT3	Q86VF5	341 aa		18.51	■□□□□ 0.55
LTBP4-227	ENST00000600026	OR5D18	Q8NGL1	313 aa		18.51	■□□□□ 0.55
LTBP4-227	ENST00000600026	OR6M1	Q8NGM8	313 aa		18.51	■□□□□ 0.55
LTBP4-227	ENST00000600026	TNFAIP8L1	Q8WVP5	186 aa		18.51	■□□□□ 0.55
LTBP4-227	ENST00000600026	SLC25A46	Q96AG3	418 aa		18.51	■□□□□ 0.55
LTBP4-227	ENST00000600026	PIMREG	Q9BSJ6	248 aa		18.51	■□□□□ 0.55
LTBP4-227	ENST00000600026	TLNRD1	Q9H1K6	362 aa		18.51	■□□□□ 0.55
LTBP4-227	ENST00000600026	UFSP2	Q9NUQ7	469 aa		18.51	■□□□□ 0.55
LTBP4-227	ENST00000600026	IFITM5	A6NNB3	132 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	NDUFS8	O00217	210 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	PLAT	P00750	562 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	SOX6	P35712	828 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	PTGFR	P43088	359 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	RORC	P51449	518 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	CAV3	P56539	151 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	PDZK1IP1	Q13113	114 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	RAB11B	Q15907	218 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	HFE	Q30201	348 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	HES5	Q5TA89	166 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	RNF144B	Q7Z419	303 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	LYPD6	Q86Y78	171 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	CALHM1	Q8IU99	346 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	OR11L1	Q8NGX0	322 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	ZNF671	Q8TAW3	534 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	CCL17	Q92583	94 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	CNTD2	Q9H8S5	307 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	GCM1	Q9NP62	436 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	C1orf123	Q9NWV4	160 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	DCAF16	Q9NXF7	216 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	STEAP1	Q9UHE8	339 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	PPP1R3C	Q9UQK1	317 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	MRPS28	Q9Y2Q9	187 aa	Known RBP	18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	POLDIP2	Q9Y2S7	368 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026	ZFHX3	Q15911	3703 aa		18.5	■□□□□ 0.55
LTBP4-227	ENST00000600026		A0A0G2JK05	382 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	IFNL4	K9M1U5	179 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	AIP	O00170	330 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	CDIPT	O14735	213 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	TMEM127	O75204	238 aa		18.49	■□□□□ 0.55
LTBP4-227	ENST00000600026	MPZ	P25189	248 aa		18.49	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms