RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 CCNKO75909 580 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 F10P00742 488 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 SERPINA3P01011 423 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 IGLV3-19P01714 112 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 ADRA2AP08913 450 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 SLC35E2P0CK97 266 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 LIMS3P0CW19 117 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 LIMS4P0CW20 117 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 TRAPPC2P0DI81 140 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 TRAPPC2BP0DI82 140 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 IL7P13232 177 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 RNH1P13489 461 aaKnown RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 PVRP15151 417 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 SPNP16150 400 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 ZNF3P17036 446 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 GABRG2P18507 467 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 CELP19835 753 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 F8A1P23610 371 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 RPL4P36578 427 aaKnown RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 TALDO1P37837 337 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 ZNF136P52737 540 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 CTBP2P56545 445 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 OR2B6P58173 313 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 VSX2P58304 361 aaPredicted RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 RPS25P62851 125 aaKnown RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 UBE2IP63279 158 aaKnown RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 HOXC5Q00444 222 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 FABP5Q01469 135 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 PAX8Q06710 450 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 STX4Q12846 297 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 BIKQ13323 160 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 ASAH1Q13510 395 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 QPRTQ15274 297 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 ZMYND11Q15326 602 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 OR1Q1Q15612 314 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 ZNF791Q3KP31 576 aaPredicted RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 TRMT12Q53H54 448 aaKnown RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 CCNJQ5T5M9 372 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 MRPL2Q5T653 305 aaKnown RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 FHL5Q5TD97 284 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 OR2G6Q5TZ20 316 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 RSBN1Q5VWQ0 802 aaPredicted RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 KCNIP4Q6PIL6 250 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 CD200R1LQ6Q8B3 271 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 PAQR6Q6TCH4 344 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 ZNF322Q6U7Q0 402 aaPredicted RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 STAC2Q6ZMT1 411 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 RTL4Q6ZR62 310 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 NCCRP1Q6ZVX7 275 aaPredicted RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 TIPARPQ7Z3E1 657 aaKnown RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 LHFPL3Q86UP9 236 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 TPRA1Q86W33 373 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 MARCH9Q86YJ5 346 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 ZNF440Q8IYI8 595 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 TMEM123Q8N131 208 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 CA13Q8N1Q1 262 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 WDSUB1Q8N9V3 476 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 ZSCAN4Q8NAM6 433 aaPredicted RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 C19orf18Q8NEA5 215 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 ATP6V1C2Q8NEY4 427 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 BEST4Q8NFU0 473 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 OR4F15Q8NGB8 312 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 OR6C4Q8NGE1 309 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 OR51G2Q8NGK0 314 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 OR4Q3Q8NH05 313 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 CCL4L1Q8NHW4 92 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 FLVCR1-AS1Q8TAF5 88 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 NEIL3Q8TAT5 605 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 ENKURQ8TC29 256 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 SLC37A2Q8TED4 501 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 DNAJA4Q8WW22 397 aaPredicted RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 FAM3CQ92520 227 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 FGF11Q92914 225 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 SLC35B4Q969S0 331 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 DIRAS2Q96HU8 199 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 ZNF578Q96N58 590 aaPredicted RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 TMED9Q9BVK6 235 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 RSPO3Q9BXY4 272 aaPredicted RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 OR52D1Q9H346 318 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 RAB18Q9NP72 206 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 ABCB9Q9NP78 766 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 CMC2Q9NRP2 79 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 BABAM2Q9NXR7 383 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 QPCTLQ9NXS2 382 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 MRPL39Q9NYK5 338 aaKnown RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 MAT2BQ9NZL9 334 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 KLHL21Q9UJP4 597 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 ZNF223Q9UK11 482 aaPredicted RBP2.94□□□□□ -1.94
UBR1-211ENST00000569971 ZNF221Q9UK13 617 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 CA5BQ9Y2D0 317 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 SLC35A3Q9Y2D2 325 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 NTNG1Q9Y2I2 539 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 PCNTO95613 3336 aa2.94□□□□□ -1.94
UBR1-211ENST00000569971 PLXND1Q9Y4D7 1925 aa2.93□□□□□ -1.94
UBR1-211ENST00000569971 SPTY2D1-AS1A0A0U1RR47 76 aa2.93□□□□□ -1.94
UBR1-211ENST00000569971 LINC00854A0A1B0GVQ3 168 aa2.93□□□□□ -1.94
UBR1-211ENST00000569971 A0A1B0GWA3 101 aa2.93□□□□□ -1.94
UBR1-211ENST00000569971 EPOPA6NHQ4 379 aa2.93□□□□□ -1.94
UBR1-211ENST00000569971 FAM183AA6NL82 134 aa2.93□□□□□ -1.94
UBR1-211ENST00000569971 EFCAB7A8K855 629 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms