RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 FAM71F1Q96KD3 344 aaPredicted RBP3.96□□□□□ -1.78
CDR2-203ENST00000563573 PGLYRP3Q96LB9 341 aa3.96□□□□□ -1.78
CDR2-203ENST00000563573 HIST1H2AAQ96QV6 131 aa3.96□□□□□ -1.78
CDR2-203ENST00000563573 MED18Q9BUE0 208 aa3.96□□□□□ -1.78
CDR2-203ENST00000563573 BCL2L14Q9BZR8 327 aa3.96□□□□□ -1.78
CDR2-203ENST00000563573 NAA50Q9GZZ1 169 aaKnown RBP3.96□□□□□ -1.78
CDR2-203ENST00000563573 DCSTAMPQ9H295 470 aa3.96□□□□□ -1.78
CDR2-203ENST00000563573 OPA3Q9H6K4 179 aa3.96□□□□□ -1.78
CDR2-203ENST00000563573 ESRP2Q9H6T0 727 aaKnown RBP3.96□□□□□ -1.78
CDR2-203ENST00000563573 PLEKHA1Q9HB21 404 aa3.96□□□□□ -1.78
CDR2-203ENST00000563573 GPR84Q9NQS5 396 aa3.96□□□□□ -1.78
CDR2-203ENST00000563573 ZNF275Q9NSD4 429 aaPredicted RBP3.96□□□□□ -1.78
CDR2-203ENST00000563573 GAR1Q9NY12 217 aaKnown RBP3.96□□□□□ -1.78
CDR2-203ENST00000563573 CRNNQ9UBG3 495 aaPredicted RBP3.96□□□□□ -1.78
CDR2-203ENST00000563573 ITGB1BP2Q9UKP3 347 aa3.96□□□□□ -1.78
CDR2-203ENST00000563573 FOXJ3Q9UPW0 622 aa3.96□□□□□ -1.78
CDR2-203ENST00000563573 STARD10Q9Y365 291 aa3.96□□□□□ -1.78
CDR2-203ENST00000563573 SLC25A15Q9Y619 301 aa3.96□□□□□ -1.78
CDR2-203ENST00000563573 UBR5O95071 2799 aaPredicted RBP3.95□□□□□ -1.78
CDR2-203ENST00000563573 COL6A6A6NMZ7 2263 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 IGHV1-18A0A0C4DH31 117 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 TRBV5-5A0A0J9YX44 114 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 A0A1B0GTI1 187 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 LOC107986453A0A1B0GWG9 222 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 A0A1W2PPK0 400 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 LOC390937A0A1W2PQ73 354 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 NKX2-6A6NCS4 301 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 GGT3PA6NGU5 568 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 TUBAL3A6NHL2 446 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 ANXA2P2A6NMY6 339 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 DHRS7CA6NNS2 312 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 ANKRD30BLA7E2S9 258 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 H3BSH0 61 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 RAB27BO00194 218 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 SC5DO75845 299 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 DHRS3O75911 302 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 IGLV1-44P01699 117 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 MAS1P04201 325 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 PRB1P04280 392 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 UCHL1P09936 223 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 ZNF35P13682 527 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 ZNF182P17025 639 aaPredicted RBP3.95□□□□□ -1.78
CDR2-203ENST00000563573 RAB3AP20336 220 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 PTAFRP25105 342 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 GCH1P30793 250 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 CCKARP32238 428 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 SDC2P34741 201 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 THBS4P35443 961 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 PPP1CBP62140 327 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 RPS23P62266 143 aaKnown RBP3.95□□□□□ -1.78
CDR2-203ENST00000563573 RPS11P62280 158 aaKnown RBP eCLIP3.95□□□□□ -1.78
CDR2-203ENST00000563573 PPP3R1P63098 170 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 SORDQ00796 357 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 MXD1Q05195 221 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 MFGE8Q08431 387 aaPredicted RBP3.95□□□□□ -1.78
CDR2-203ENST00000563573 CNPY1Q3B7I2 92 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 KRTAP27-1Q3LI81 207 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 GLYATL3Q5SZD4 288 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 GLT8D1Q68CQ7 371 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 MZT2AQ6P582 158 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 TMEM65Q6PI78 240 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 COLCA1Q6ZS62 124 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 SLC16A12Q6ZSM3 486 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 PRSS45Q7RTY3 260 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 ZNF584Q8IVC4 421 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 NRACQ8N912 160 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 CSNK2A3Q8NEV1 391 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 TMEM171Q8WVE6 324 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 PP6455Q8WZ26 134 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 AP3S1Q92572 193 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 RPL3LQ92901 407 aaKnown RBP3.95□□□□□ -1.78
CDR2-203ENST00000563573 CMBLQ96DG6 245 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 CPNE2Q96FN4 548 aaPredicted RBP3.95□□□□□ -1.78
CDR2-203ENST00000563573 ZC3HAV1LQ96H79 300 aaKnown RBP3.95□□□□□ -1.78
CDR2-203ENST00000563573 RADILQ96JH8 1075 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 ZNF75AQ96N20 296 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 WFIKKN1Q96NZ8 548 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 TECTBQ96PL2 329 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 DERL3Q96Q80 235 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 CENPOQ9BU64 300 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 RBM38Q9H0Z9 239 aaKnown RBP3.95□□□□□ -1.78
CDR2-203ENST00000563573 TPK1Q9H3S4 243 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 NOX3Q9HBY0 568 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 NOX4Q9NPH5 578 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 SNTG1Q9NSN8 517 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 PTTG3PQ9NZH4 202 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 SLC7A11Q9UPY5 501 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 PIGLQ9Y2B2 252 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 V9GYS6 101 aa3.95□□□□□ -1.78
CDR2-203ENST00000563573 GCN1Q92616 2671 aaKnown RBP3.95□□□□□ -1.78
CDR2-203ENST00000563573 SPTA1P02549 2419 aa3.94□□□□□ -1.78
CDR2-203ENST00000563573 TRBV5-7A0A0A0MS05 114 aa3.94□□□□□ -1.78
CDR2-203ENST00000563573 IGHV2OR16-5A0A0B4J2B6 119 aa3.94□□□□□ -1.78
CDR2-203ENST00000563573 ZNF816-ZNF321PA0A0X1KG74 233 aa3.94□□□□□ -1.78
CDR2-203ENST00000563573 A0A1W2PPW3 197 aa3.94□□□□□ -1.78
CDR2-203ENST00000563573 ZG16O60844 167 aa3.94□□□□□ -1.78
CDR2-203ENST00000563573 NRASP01111 189 aa3.94□□□□□ -1.78
CDR2-203ENST00000563573 NGFP01138 241 aa3.94□□□□□ -1.78
CDR2-203ENST00000563573 IGLV3-1P01715 115 aa3.94□□□□□ -1.78
CDR2-203ENST00000563573 ALDOBP05062 364 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms