RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 TUBG1P23258 451 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 CASP1P29466 404 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 BMI1P35226 326 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 MAS1LP35410 378 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 AKR1D1P51857 326 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 GABARAPL2P60520 117 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 UBE2MP61081 183 aaKnown RBP2.98□□□□□ -1.93
PRPF39-210ENST00000556718 HERVK_113P61574 105 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 YWHAEP62258 255 aaKnown RBP2.98□□□□□ -1.93
PRPF39-210ENST00000556718 SLC7A9P82251 487 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 PRKCDQ05655 676 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 STX4Q12846 297 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 SLC39A6Q13433 755 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 GGTLC2Q14390 218 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 CAPRIN1Q14444 709 aaKnown RBP2.98□□□□□ -1.93
PRPF39-210ENST00000556718 DMC1Q14565 340 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 PON2Q15165 354 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 NEDD8Q15843 81 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 ZNF726P1Q15940 193 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 TMEM183BQ1AE95 376 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 YIF1BQ5BJH7 314 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 ADNP2Q6IQ32 1131 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 C3orf33Q6P1S2 294 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 MBOAT2Q6ZWT7 520 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 PAGE2Q7Z2X7 111 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 NKAIN4Q8IVV8 208 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 TMEM183AQ8IXX5 376 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 PRSS58Q8IYP2 241 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 BLIDQ8IZY5 108 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 VKORC1L1Q8N0U8 176 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 PGAM4Q8N0Y7 254 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 CBR4Q8N4T8 237 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 Q8N9W7 124 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 LRRC75AQ8NAA5 344 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 ZNF680Q8NEM1 530 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 OR10J6PQ8NGY7 276 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 MCFD2Q8NI22 146 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 CYGBQ8WWM9 190 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 DEDD2Q8WXF8 326 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 EXOSC8Q96B26 276 aaKnown RBP2.98□□□□□ -1.93
PRPF39-210ENST00000556718 CREB3L1Q96BA8 519 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 SEH1LQ96EE3 360 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 BTN2A3PQ96KV6 586 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 HYLS1Q96M11 299 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 RDH12Q96NR8 316 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 HDHD3Q9BSH5 251 aaPredicted RBP2.98□□□□□ -1.93
PRPF39-210ENST00000556718 CCDC32Q9BV29 185 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 SLC19A3Q9BZV2 496 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 SLC22A4Q9H015 551 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 XKR8Q9H6D3 395 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 SYNDIG1Q9H7V2 258 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 ACP6Q9NPH0 428 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 TUBG2Q9NRH3 451 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 SCN3BQ9NY72 215 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 ADA2Q9NZK5 511 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 FLVCR2Q9UPI3 526 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 PRELID3BQ9Y3B1 194 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 RNF11Q9Y3C5 154 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 ORC6Q9Y5N6 252 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 F11RQ9Y624 299 aaKnown RBP2.98□□□□□ -1.93
PRPF39-210ENST00000556718 MRPS18BQ9Y676 258 aaKnown RBP2.98□□□□□ -1.93
PRPF39-210ENST00000556718 ADAMTS13Q76LX8 1427 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 CPS1P31327 1500 aa2.98□□□□□ -1.93
PRPF39-210ENST00000556718 COL22A1Q8NFW1 1626 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-210ENST00000556718 C1orf167Q5SNV9 1468 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 A0A1B0GUH1 482 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 PQLC2LA1A4F0 135 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 NKX2-6A6NCS4 301 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 LEUTXA8MZ59 168 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 SIVA1O15304 175 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 CST8O60676 142 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 RDH16O75452 317 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 AQP8O94778 261 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 SLC25A27O95847 323 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 HPRT1P00492 218 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 S100A8P05109 93 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 SERPINE1P05121 402 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 CDK1P06493 297 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 BPGMP07738 259 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 RBP1P09455 135 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 HOXB8P17481 243 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-210ENST00000556718 PMCHP20382 165 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 PTNP21246 168 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 HLA-DMAP28067 261 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 CEACAM6P40199 344 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 UBE2AP49459 152 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 NUDT2P50583 147 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 NKX2-5P52952 324 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-210ENST00000556718 TSPAN5P62079 268 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 RPS15AP62244 130 aaKnown RBP2.97□□□□□ -1.93
PRPF39-210ENST00000556718 NDPQ00604 133 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 GINS1Q14691 196 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 PSG5Q15238 335 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 GRK1Q15835 563 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 HNRNPA1L2Q32P51 320 aaKnown RBP2.97□□□□□ -1.93
PRPF39-210ENST00000556718 PIGGQ5H8A4 983 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 TEX30Q5JUR7 227 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 LIN9Q5TKA1 542 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 AADACL4Q5VUY2 407 aa2.97□□□□□ -1.93
PRPF39-210ENST00000556718 MLIPQ5VWP3 458 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms