RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 GLIPR1L1Q6UWM5 242 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 Q6ZR03 302 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 OR2W3Q7Z3T1 314 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 PEG10Q86TG7 708 aaKnown RBP9.52□□□□□ -0.89
SHMT2-220ENST00000555634 ANGPTL5Q86XS5 388 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 PXT1Q8NFP0 134 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 OR51F2Q8NH61 342 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 LILRB1Q8NHL6 650 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-220ENST00000555634 KCNG3Q8TAE7 436 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 ITLN1Q8WWA0 313 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 TRAF4Q9BUZ4 470 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-220ENST00000555634 TMEM59Q9BXS4 323 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 MMP27Q9H306 513 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 BARX1Q9HBU1 254 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-220ENST00000555634 ING4Q9UNL4 249 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 PEX16Q9Y5Y5 336 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 NPTNQ9Y639 398 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 PKDREJQ9NTG1 2253 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 ADGRG4Q8IZF6 3080 aa9.52□□□□□ -0.89
SHMT2-220ENST00000555634 ARFGEF3Q5TH69 2177 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 H0YL77 283 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 H7C417 338 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 NXPH2O95156 264 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 CLEC2LP0C7M8 214 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 GTF2F2P13984 249 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 CPT2P23786 658 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 GATA4P43694 442 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 CAV3P56539 151 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 P2RY14Q15391 338 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 KCNJ8Q15842 424 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 MSMPQ1L6U9 139 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 SWI5Q1ZZU3 235 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 SLC22A6Q4U2R8 563 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 ASPHD2Q6ICH7 369 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 LINC00596Q86U02 117 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 SAMD12Q8N8I0 201 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 SCCPDHQ8NBX0 429 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 LGALS14Q8TCE9 139 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 EMG1Q92979 244 aaKnown RBP9.51□□□□□ -0.89
SHMT2-220ENST00000555634 SLAMF9Q96A28 289 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 FAM3DQ96BQ1 224 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 MRPS24Q96EL2 167 aaKnown RBP9.51□□□□□ -0.89
SHMT2-220ENST00000555634 TIMD4Q96H15 378 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 OR51I2Q9H344 312 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 MYOZ1Q9NP98 299 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-220ENST00000555634 UFSP2Q9NUQ7 469 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 C1orf123Q9NWV4 160 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 IL36GQ9NZH8 169 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 DNAJB11Q9UBS4 358 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 DOPEY2Q9Y3R5 2298 aa9.51□□□□□ -0.89
SHMT2-220ENST00000555634 CACNA1DQ01668 2161 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 A0A075B6Q4 140 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 IGHV1-69-2A0A0G2JMI3 117 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 SHISA3A0PJX4 238 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 FAM221AA4D161 298 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 FAM25AB3EWG3 89 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 FAM25CB3EWG5 89 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 FAM25GB3EWG6 89 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 SPRY1O43609 319 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-220ENST00000555634 CLPXO76031 633 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 HTR3BO95264 441 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 SLC2A2P11168 524 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-220ENST00000555634 RAB6AP20340 208 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 MPZP25189 248 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 ART1P52961 327 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 DMRTC1Q5HYR2 192 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 TMEM255AQ5JRV8 349 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 SPANXN2Q5MJ10 180 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 PRAMEF6Q5VXH4 476 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 RAB12Q6IQ22 244 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 BAIAP2L2Q6UXY1 529 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 MOGAT3Q86VF5 341 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 LRRC28Q86X40 367 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-220ENST00000555634 OR4D6Q8NGJ1 314 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 OR10Z1Q8NGY1 313 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 LRRC29Q8WV35 223 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 RAB40AQ8WXH6 277 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 AQP3Q92482 292 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 GTF3AQ92664 365 aaKnown RBP9.5□□□□□ -0.89
SHMT2-220ENST00000555634 PTX4Q96A99 478 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 CMTM3Q96MX0 182 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 PSMG3-AS1Q96PY0 264 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 TLNRD1Q9H1K6 362 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 DLL4Q9NR61 685 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 RASL12Q9NYN1 266 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 COMMD3Q9UBI1 195 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 RABL2AQ9UBK7 228 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-220ENST00000555634 SPATA2Q9UM82 520 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 RABL2BQ9UNT1 228 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 ICE1Q9Y2F5 2266 aa9.5□□□□□ -0.89
SHMT2-220ENST00000555634 A0A0G2JK05 382 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 NKX6-3A6NJ46 265 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 CLDN25C9JDP6 229 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 CDIPTO14735 213 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 ANGPTL7O43827 346 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 MPIG6BO95866 241 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 SOD3P08294 240 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 CSF3P09919 207 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 DANCRP0C864 163 aa9.49□□□□□ -0.89
SHMT2-220ENST00000555634 GLRA1P23415 457 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms