RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 PORCNQ9H237 461 aa3.43□□□□□ -1.86
PSEN1-211ENST00000554995 PRORYQ9H606 182 aa3.43□□□□□ -1.86
PSEN1-211ENST00000554995 CD300AQ9UGN4 299 aa3.43□□□□□ -1.86
PSEN1-211ENST00000554995 CYB5R1Q9UHQ9 305 aa3.43□□□□□ -1.86
PSEN1-211ENST00000554995 ENPP5Q9UJA9 477 aa3.43□□□□□ -1.86
PSEN1-211ENST00000554995 KIF14Q15058 1648 aa3.43□□□□□ -1.86
PSEN1-211ENST00000554995 TP53BP1Q12888 1972 aaPredicted RBP3.43□□□□□ -1.86
PSEN1-211ENST00000554995 ARHGEF12Q9NZN5 1544 aa3.43□□□□□ -1.86
PSEN1-211ENST00000554995 TRAPPC8Q9Y2L5 1435 aa3.43□□□□□ -1.86
PSEN1-211ENST00000554995 ZNFX1Q9P2E3 1918 aaKnown RBP3.42□□□□□ -1.86
PSEN1-211ENST00000554995 NUP153P49790 1475 aaKnown RBP3.42□□□□□ -1.86
PSEN1-211ENST00000554995 SIGLEC1Q9BZZ2 1709 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 ROCK1Q13464 1354 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 RAB3GAP2Q9H2M9 1393 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 IGHV3-72A0A0B4J1Y9 119 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 RNASEK-C17orf49H0YIS7 233 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 ZNF207O43670 478 aaKnown RBP3.42□□□□□ -1.86
PSEN1-211ENST00000554995 EIF1BO60739 113 aaKnown RBP3.42□□□□□ -1.86
PSEN1-211ENST00000554995 CTDNEP1O95476 244 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 LDOC1O95751 146 aaPredicted RBP3.42□□□□□ -1.86
PSEN1-211ENST00000554995 FADS2O95864 444 aaKnown RBP3.42□□□□□ -1.86
PSEN1-211ENST00000554995 IGKV1D-16P01601 117 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 CD8AP01732 235 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 ZNF806P0C7X5 589 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 EIF1P41567 113 aaKnown RBP3.42□□□□□ -1.86
PSEN1-211ENST00000554995 OR2B6P58173 313 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 DSTNP60981 165 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 KRT71Q3SY84 523 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 CDNFQ49AH0 187 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 TTC32Q5I0X7 151 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 HHATQ5VTY9 493 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 ZNF470Q6ECI4 717 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 Q6P435 159 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 ERICH5Q6P6B1 374 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 COMTD1Q86VU5 262 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 TMEM256Q8N2U0 113 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 Q8N9L7 120 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 OR4M1Q8NGD0 313 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 ENKURQ8TC29 256 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 CTRCQ99895 268 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 SLC38A1Q9H2H9 487 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 CHMP4BQ9H444 224 aaKnown RBP3.42□□□□□ -1.86
PSEN1-211ENST00000554995 TMBIM4Q9HC24 238 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 RHBDL2Q9NX52 303 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 MAT2BQ9NZL9 334 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 ORC6Q9Y5N6 252 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 TNS2Q63HR2 1409 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 ARHGEF5Q12774 1597 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 FRMPD1Q5SYB0 1578 aa3.42□□□□□ -1.86
PSEN1-211ENST00000554995 MYO5CQ9NQX4 1742 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 ADGRL2O95490 1459 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 NEO1Q92859 1461 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 CDK12Q9NYV4 1490 aaPredicted RBP3.41□□□□□ -1.86
PSEN1-211ENST00000554995 SHANK2Q9UPX8 1470 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 LRP5O75197 1615 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 PREX2Q70Z35 1606 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 LRRC7Q96NW7 1537 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 TDRD6O60522 2096 aaKnown RBP3.41□□□□□ -1.86
PSEN1-211ENST00000554995 CCL15-CCL14A0A0B4J2E2 113 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 RBFOX2O43251 390 aaKnown RBP eCLIP3.41□□□□□ -1.86
PSEN1-211ENST00000554995 CCDC22O60826 627 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 BRI3O95415 125 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 IGLV2-8P01709 118 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 HLA-DQA1P01909 254 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 ADRA2AP08913 450 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 GIMD1P0DJR0 217 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 TSPAN5P62079 268 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 TOMM34Q15785 309 aaPredicted RBP3.41□□□□□ -1.86
PSEN1-211ENST00000554995 CCL15Q16663 113 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 SLC25A35Q3KQZ1 300 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 SYT6Q5T7P8 510 aaPredicted RBP3.41□□□□□ -1.86
PSEN1-211ENST00000554995 Q5W150 140 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 ENTHD1Q8IYW4 607 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 TTLQ8NG68 377 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 OR2Y1Q8NGV0 311 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 CIRBP-AS1Q8TBR5 109 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 SERPINB11Q96P15 392 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 ALS2CR12Q96Q35 445 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 CYTH2Q99418 400 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 VAT1Q99536 393 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 VCXQ9H320 206 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 WDR55Q9H6Y2 383 aaPredicted RBP3.41□□□□□ -1.86
PSEN1-211ENST00000554995 ZNF430Q9H8G1 570 aaPredicted RBP3.41□□□□□ -1.86
PSEN1-211ENST00000554995 FARSAQ9Y285 508 aaKnown RBP3.41□□□□□ -1.86
PSEN1-211ENST00000554995 TROQ12816 1431 aaPredicted RBP3.41□□□□□ -1.86
PSEN1-211ENST00000554995 NAIPQ13075 1403 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 CEP350Q5VT06 3117 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 IGSF9BQ9UPX0 1349 aa3.41□□□□□ -1.86
PSEN1-211ENST00000554995 CDK13Q14004 1512 aaKnown RBP3.4□□□□□ -1.86
PSEN1-211ENST00000554995 IGHV6-1A0A0B4J1U7 121 aa3.4□□□□□ -1.87
PSEN1-211ENST00000554995 IGHV7-4-1A0A0J9YVY3 117 aa3.4□□□□□ -1.87
PSEN1-211ENST00000554995 CETN3O15182 167 aa3.4□□□□□ -1.87
PSEN1-211ENST00000554995 NDUFS5O43920 106 aa3.4□□□□□ -1.87
PSEN1-211ENST00000554995 ME2P23368 584 aa3.4□□□□□ -1.87
PSEN1-211ENST00000554995 PSMB5P28074 263 aa3.4□□□□□ -1.87
PSEN1-211ENST00000554995 CXCL12P48061 93 aa3.4□□□□□ -1.87
PSEN1-211ENST00000554995 ERFP50548 548 aa3.4□□□□□ -1.87
PSEN1-211ENST00000554995 ZNF684Q5T5D7 378 aa3.4□□□□□ -1.87
PSEN1-211ENST00000554995 ZNF691Q5VV52 312 aa3.4□□□□□ -1.87
PSEN1-211ENST00000554995 PDPK2PQ6A1A2 396 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms