RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 RPSAP08865 295 aaKnown RBP16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 ACAA1P09110 424 aaPredicted RBP16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 DUX4L2P0CJ85 424 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 DUX4L3P0CJ86 424 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 DUX4L4P0CJ87 422 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 DUX4L5P0CJ88 424 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 DUX4L6P0CJ89 424 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 DUX4L7P0CJ90 424 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 LIMS3P0CW19 117 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 LIMS4P0CW20 117 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 MPZP25189 248 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 DCKP27707 260 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 CAPGP40121 348 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 FUT6P51993 359 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 SLC34A1Q06495 639 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 DUX4L9Q6RFH8 374 aaPredicted RBP16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 ST8SIA4Q92187 359 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 PKIBQ9C010 78 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 DUX4Q9UBX2 424 aa16.64■□□□□ 0.25
CACNA2D4-215ENST00000542340 FAM230AA0A1W2PPH8 454 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 ZNF879B4DU55 563 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 SYNGR1O43759 233 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 PGA5P0DJD9 388 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 PSG2P11465 335 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 GBX2P52951 348 aaPredicted RBP16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 FGF12P61328 243 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 IL13RA1P78552 427 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 SRSF2Q01130 221 aaKnown RBP16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 IL24Q13007 206 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 KRTAP24-1Q3LI83 254 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 LRRC10Q5BKY1 277 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 ACP7Q6ZNF0 438 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 BPIFB2Q8N4F0 458 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 ZNF676Q8N7Q3 588 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 TRMT10AQ8TBZ6 339 aaKnown RBP16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 FGGYQ96C11 551 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 ADAT3Q96EY9 351 aaPredicted RBP16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 DMRTB1Q96MA1 342 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 GAFA1Q96PS6 74 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 NRIP2Q9BQI9 281 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 SUCNR1Q9BXA5 334 aa16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 NKX1-2Q9UD57 310 aaPredicted RBP16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 RPUSD1Q9UJJ7 312 aaKnown RBP16.63■□□□□ 0.25
CACNA2D4-215ENST00000542340 IGKV1D-17A0A075B6S4 117 aa16.62■□□□□ 0.25
CACNA2D4-215ENST00000542340 SIGLEC5O15389 551 aa16.62■□□□□ 0.25
CACNA2D4-215ENST00000542340 IKZF1Q13422 519 aa16.62■□□□□ 0.25
CACNA2D4-215ENST00000542340 CNN3Q15417 329 aaKnown RBP16.62■□□□□ 0.25
CACNA2D4-215ENST00000542340 SMIM21Q3B7S5 101 aa16.62■□□□□ 0.25
CACNA2D4-215ENST00000542340 UTS2BQ765I0 119 aa16.62■□□□□ 0.25
CACNA2D4-215ENST00000542340 ANGPTL5Q86XS5 388 aa16.62■□□□□ 0.25
CACNA2D4-215ENST00000542340 CALHM1Q8IU99 346 aa16.62■□□□□ 0.25
CACNA2D4-215ENST00000542340 C8orf59Q8N0T1 100 aaPredicted RBP16.62■□□□□ 0.25
CACNA2D4-215ENST00000542340 DNAAF1Q8NEP3 725 aa16.62■□□□□ 0.25
CACNA2D4-215ENST00000542340 SPATA3Q8NHX4 192 aa16.62■□□□□ 0.25
CACNA2D4-215ENST00000542340 ZNF69Q9UC07 566 aa16.62■□□□□ 0.25
CACNA2D4-215ENST00000542340 ZNF222Q9UK12 451 aa16.62■□□□□ 0.25
CACNA2D4-215ENST00000542340 DIMT1Q9UNQ2 313 aaKnown RBP16.62■□□□□ 0.25
CACNA2D4-215ENST00000542340 CAB39Q9Y376 341 aaPredicted RBP16.62■□□□□ 0.25
CACNA2D4-215ENST00000542340 ERICH4A6NGS2 130 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 TMEM212A6NML5 194 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 E9PI62 339 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 GNAO1P09471 354 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 CCDC159P0C7I6 412 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 ZNF20P17024 532 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 GABRA2P47869 451 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 ETV1P50549 477 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 HILS1P60008 231 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 DGUOKQ16854 277 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 TUSC1Q2TAM9 212 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 TMPRSS11AQ6ZMR5 421 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 FGFRL1Q8N441 504 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 LY6G5BQ8NDX9 201 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 OR51A4Q8NGJ6 313 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 OR10AC1Q8NH08 325 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 NPRL2Q8WTW4 380 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 C22orf15Q8WYQ4 148 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 BORCS8Q96FH0 119 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 SDSLQ96GA7 329 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 ZNF488Q96MN9 340 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 JMJD8Q96S16 334 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 SLC6A7Q99884 636 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 CNTD2Q9H8S5 307 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 HES4Q9HCC6 221 aa16.61■□□□□ 0.25
CACNA2D4-215ENST00000542340 IGKV1-27A0A075B6S5 117 aa16.6■□□□□ 0.25
CACNA2D4-215ENST00000542340 NXPH2O95156 264 aa16.6■□□□□ 0.25
CACNA2D4-215ENST00000542340 ZFPL1O95159 310 aa16.6■□□□□ 0.25
CACNA2D4-215ENST00000542340 VENTXO95231 258 aa16.6■□□□□ 0.25
CACNA2D4-215ENST00000542340 PLATP00750 562 aa16.6■□□□□ 0.25
CACNA2D4-215ENST00000542340 TFF1P04155 84 aa16.6■□□□□ 0.25
CACNA2D4-215ENST00000542340 IGHV4-38-2P0DP08 117 aa16.6■□□□□ 0.25
CACNA2D4-215ENST00000542340 SELLP14151 372 aa16.6■□□□□ 0.25
CACNA2D4-215ENST00000542340 MMP9P14780 707 aa16.6■□□□□ 0.25
CACNA2D4-215ENST00000542340 ATF1P18846 271 aa16.6■□□□□ 0.25
CACNA2D4-215ENST00000542340 MYL12AP19105 171 aa16.6■□□□□ 0.25
CACNA2D4-215ENST00000542340 PRKACBP22694 351 aa16.6■□□□□ 0.25
CACNA2D4-215ENST00000542340 RBP2P50120 134 aa16.6■□□□□ 0.25
CACNA2D4-215ENST00000542340 CAV3P56539 151 aa16.6■□□□□ 0.25
CACNA2D4-215ENST00000542340 ERVK11-1P61568 191 aa16.6■□□□□ 0.25
CACNA2D4-215ENST00000542340 CCDC58Q4VC31 144 aa16.6■□□□□ 0.25
CACNA2D4-215ENST00000542340 C9orf139Q6ZV77 190 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms