RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 CRLF3Q8IUI8 442 aa2.57□□□□□ -2
USP28-210ENST00000542033 PDZD9Q8IXQ8 264 aa2.57□□□□□ -2
USP28-210ENST00000542033 SLC34A3Q8N130 599 aa2.57□□□□□ -2
USP28-210ENST00000542033 MS4A15Q8N5U1 240 aa2.57□□□□□ -2
USP28-210ENST00000542033 METTL13Q8N6R0 699 aa2.57□□□□□ -2
USP28-210ENST00000542033 OR2AP1Q8NGE2 309 aa2.57□□□□□ -2
USP28-210ENST00000542033 OR1B1Q8NGR6 318 aa2.57□□□□□ -2
USP28-210ENST00000542033 OR13C8Q8NGS7 320 aa2.57□□□□□ -2
USP28-210ENST00000542033 OR10R2Q8NGX6 335 aa2.57□□□□□ -2
USP28-210ENST00000542033 OR4Q3Q8NH05 313 aa2.57□□□□□ -2
USP28-210ENST00000542033 OR4S2Q8NH73 311 aa2.57□□□□□ -2
USP28-210ENST00000542033 OR10A6Q8NH74 314 aa2.57□□□□□ -2
USP28-210ENST00000542033 PIGXQ8TBF5 258 aa2.57□□□□□ -2
USP28-210ENST00000542033 FAM45AQ8TCE6 357 aa2.57□□□□□ -2
USP28-210ENST00000542033 SPPL2BQ8TCT7 592 aa2.57□□□□□ -2
USP28-210ENST00000542033 ABHD3Q8WU67 409 aa2.57□□□□□ -2
USP28-210ENST00000542033 APH1BQ8WW43 257 aa2.57□□□□□ -2
USP28-210ENST00000542033 ASB17Q8WXJ9 295 aa2.57□□□□□ -2
USP28-210ENST00000542033 MRPS31Q92665 395 aaKnown RBP2.57□□□□□ -2
USP28-210ENST00000542033 TFGQ92734 400 aaPredicted RBP2.57□□□□□ -2
USP28-210ENST00000542033 RCN3Q96D15 328 aa2.57□□□□□ -2
USP28-210ENST00000542033 ZBED6CLQ96FA7 236 aaPredicted RBP2.57□□□□□ -2
USP28-210ENST00000542033 SDSLQ96GA7 329 aa2.57□□□□□ -2
USP28-210ENST00000542033 RDH12Q96NR8 316 aa2.57□□□□□ -2
USP28-210ENST00000542033 TGM7Q96PF1 710 aa2.57□□□□□ -2
USP28-210ENST00000542033 PANX1Q96RD7 426 aa2.57□□□□□ -2
USP28-210ENST00000542033 TSNAXQ99598 290 aaKnown RBP2.57□□□□□ -2
USP28-210ENST00000542033 NPAS2Q99743 824 aa2.57□□□□□ -2
USP28-210ENST00000542033 SULT4A1Q9BR01 284 aa2.57□□□□□ -2
USP28-210ENST00000542033 ST6GALNAC5Q9BVH7 336 aa2.57□□□□□ -2
USP28-210ENST00000542033 TBL1XR1Q9BZK7 514 aa2.57□□□□□ -2
USP28-210ENST00000542033 MAGT1Q9H0U3 335 aa2.57□□□□□ -2
USP28-210ENST00000542033 BOLA2Q9H3K6 86 aa2.57□□□□□ -2
USP28-210ENST00000542033 RHOJQ9H4E5 214 aa2.57□□□□□ -2
USP28-210ENST00000542033 WDR54Q9H977 334 aa2.57□□□□□ -2
USP28-210ENST00000542033 GNB4Q9HAV0 340 aa2.57□□□□□ -2
USP28-210ENST00000542033 NOX3Q9HBY0 568 aa2.57□□□□□ -2
USP28-210ENST00000542033 SGK2Q9HBY8 427 aa2.57□□□□□ -2
USP28-210ENST00000542033 MIEF1Q9NQG6 463 aa2.57□□□□□ -2
USP28-210ENST00000542033 TAS2R16Q9NYV7 291 aa2.57□□□□□ -2
USP28-210ENST00000542033 MTCH1Q9NZJ7 389 aa2.57□□□□□ -2
USP28-210ENST00000542033 NUFIP1Q9UHK0 495 aaKnown RBP2.57□□□□□ -2
USP28-210ENST00000542033 CARHSP1Q9Y2V2 147 aaKnown RBP2.57□□□□□ -2
USP28-210ENST00000542033 URGCP-MRPS24S4R325 110 aa2.57□□□□□ -2
USP28-210ENST00000542033 PTPRFP10586 1907 aa2.57□□□□□ -2
USP28-210ENST00000542033 AKAP11Q9UKA4 1901 aa2.57□□□□□ -2
USP28-210ENST00000542033 DICER1Q9UPY3 1922 aaKnown RBP2.57□□□□□ -2
USP28-210ENST00000542033 CRB1P82279 1406 aa2.57□□□□□ -2
USP28-210ENST00000542033 NWD1Q149M9 1564 aa2.57□□□□□ -2
USP28-210ENST00000542033 VWDEQ8N2E2 1590 aa2.57□□□□□ -2
USP28-210ENST00000542033 MARF1Q9Y4F3 1742 aaKnown RBP2.56□□□□□ -2
USP28-210ENST00000542033 SIPA1L1O43166 1804 aa2.56□□□□□ -2
USP28-210ENST00000542033 MYH9P35579 1960 aaKnown RBP2.56□□□□□ -2
USP28-210ENST00000542033 CHD5Q8TDI0 1954 aa2.56□□□□□ -2
USP28-210ENST00000542033 A0A087WUJ7 227 aa2.56□□□□□ -2
USP28-210ENST00000542033 TGIF2-C20orf24A0A0A6YYL0 155 aa2.56□□□□□ -2
USP28-210ENST00000542033 A0A0D9SFI3 127 aa2.56□□□□□ -2
USP28-210ENST00000542033 A0A1B0GTI1 187 aa2.56□□□□□ -2
USP28-210ENST00000542033 A0A1B0GVY2 172 aa2.56□□□□□ -2
USP28-210ENST00000542033 EXOC1LA0A1B0GW35 172 aa2.56□□□□□ -2
USP28-210ENST00000542033 OR2AG2A6NM03 316 aa2.56□□□□□ -2
USP28-210ENST00000542033 ZNF99A8MXY4 864 aaPredicted RBP2.56□□□□□ -2
USP28-210ENST00000542033 C11orf98E9PRG8 122 aa2.56□□□□□ -2
USP28-210ENST00000542033 H3BN98 237 aa2.56□□□□□ -2
USP28-210ENST00000542033 RPL36A-HNRNPH2H7BZ11 118 aa2.56□□□□□ -2
USP28-210ENST00000542033 K7ERI5 159 aa2.56□□□□□ -2
USP28-210ENST00000542033 FAAHO00519 579 aa2.56□□□□□ -2
USP28-210ENST00000542033 CXCR6O00574 342 aa2.56□□□□□ -2
USP28-210ENST00000542033 TCF21O43680 179 aa2.56□□□□□ -2
USP28-210ENST00000542033 CDC40O60508 579 aaKnown RBP eCLIP2.56□□□□□ -2
USP28-210ENST00000542033 GLSO94925 669 aaPredicted RBP2.56□□□□□ -2
USP28-210ENST00000542033 CST4P01036 141 aa2.56□□□□□ -2
USP28-210ENST00000542033 TCRBP04435 133 aa2.56□□□□□ -2
USP28-210ENST00000542033 IGF1P05019 195 aa2.56□□□□□ -2
USP28-210ENST00000542033 CD5P06127 495 aa2.56□□□□□ -2
USP28-210ENST00000542033 CD2P06729 351 aa2.56□□□□□ -2
USP28-210ENST00000542033 NMBP08949 121 aa2.56□□□□□ -2
USP28-210ENST00000542033 H2BFMP0C1H6 154 aa2.56□□□□□ -2
USP28-210ENST00000542033 PNMTP11086 282 aa2.56□□□□□ -2
USP28-210ENST00000542033 SDC1P18827 310 aa2.56□□□□□ -2
USP28-210ENST00000542033 PGCP20142 388 aa2.56□□□□□ -2
USP28-210ENST00000542033 CRHBPP24387 322 aa2.56□□□□□ -2
USP28-210ENST00000542033 LMO2P25791 158 aa2.56□□□□□ -2
USP28-210ENST00000542033 HTR2CP28335 458 aa2.56□□□□□ -2
USP28-210ENST00000542033 SSTR5P35346 364 aa2.56□□□□□ -2
USP28-210ENST00000542033 RPL4P36578 427 aaKnown RBP2.56□□□□□ -2
USP28-210ENST00000542033 AQP2P41181 271 aa2.56□□□□□ -2
USP28-210ENST00000542033 MAGEA5P43359 124 aa2.56□□□□□ -2
USP28-210ENST00000542033 TTPAP49638 278 aa2.56□□□□□ -2
USP28-210ENST00000542033 CRYBA4P53673 196 aa2.56□□□□□ -2
USP28-210ENST00000542033 AQP5P55064 265 aa2.56□□□□□ -2
USP28-210ENST00000542033 OR4D2P58180 307 aa2.56□□□□□ -2
USP28-210ENST00000542033 LSM6P62312 80 aaKnown RBP2.56□□□□□ -2
USP28-210ENST00000542033 ADARB1P78563 741 aaKnown RBP2.56□□□□□ -2
USP28-210ENST00000542033 DEFA5Q01523 94 aa2.56□□□□□ -2
USP28-210ENST00000542033 SIGLEC14Q08ET2 396 aa2.56□□□□□ -2
USP28-210ENST00000542033 SRSF6Q13247 344 aaKnown RBP2.56□□□□□ -2
USP28-210ENST00000542033 SERTAD2Q14140 314 aa2.56□□□□□ -2
USP28-210ENST00000542033 GK3PQ14409 553 aa2.56□□□□□ -2
USP28-210ENST00000542033 PEA15Q15121 130 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms