RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 TRAT1Q6PIZ9 186 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 VASH2Q86V25 355 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 RPEQ96AT9 228 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 TMEM208Q9BTX3 173 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 ADAT1Q9BUB4 502 aaKnown RBP9.54□□□□□ -0.88
CLIP1-209ENST00000537178 SEBOXQ9HB31 216 aaPredicted RBP9.54□□□□□ -0.88
CLIP1-209ENST00000537178 OR5V1Q9UGF6 321 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 KIAA0100Q14667 2235 aaKnown RBP9.54□□□□□ -0.88
CLIP1-209ENST00000537178 A0A1W2PPC4 97 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 TNFSF15O95150 251 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 ORM1P02763 201 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 TTRP02766 147 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 FGF2P09038 288 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 PTOV1Q86YD1 416 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 RIMKLAQ8IXN7 391 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 OR52B4Q8NGK2 314 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 OR10C1Q96KK4 312 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 MS4A10Q96PG2 267 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 PECRQ9BY49 303 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 CYSLTR2Q9NS75 346 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 FKBP11Q9NYL4 201 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 MCM3APO60318 1980 aa9.54□□□□□ -0.88
CLIP1-209ENST00000537178 TCRBV5S2A0A599 114 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 NGFP01138 241 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 SLC38A11Q08AI6 406 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 TEX261Q6UWH6 196 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 OR10D4PQ8NGN7 298 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 C19orf43Q9BQ61 176 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 IFT22Q9H7X7 185 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 ISG20L2Q9H9L3 353 aaKnown RBP9.53□□□□□ -0.88
CLIP1-209ENST00000537178 AKIP1Q9NQ31 210 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 CLEC1BQ9P126 229 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 U3KQ87 197 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 CEP350Q5VT06 3117 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 TRAV17A0A0B4J275 112 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 M0R143 59 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 OPRK1P41145 380 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 GNG4P50150 75 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 GSG1Q2KHT4 349 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 SLC25A35Q3KQZ1 300 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 ZNF260Q3ZCT1 412 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 PET117Q6UWS5 81 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 SEC11CQ9BY50 192 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 PLSCR3Q9NRY6 295 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 MAP1LC3B2A6NCE7 125 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 FAM24AA6NFZ4 105 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 PRRT4C9JH25 899 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 NEURL1O76050 574 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 NDUFB6O95139 128 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 STAG3L2P0CL84 134 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 EMDP50402 254 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 RHOBP62745 196 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 CEBPEQ15744 281 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 WDR73Q6P4I2 378 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 TRILQ7L0X0 811 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 MYPOPQ86VE0 399 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-209ENST00000537178 CNRIP1Q96F85 164 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-209ENST00000537178 MAP1LC3BQ9GZQ8 125 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 PCED1AQ9H1Q7 454 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 MMP26Q9NRE1 261 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 TAAR3PQ9P1P4 343 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 A0A1B0GTQ1 180 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 A0A1W2PNV4 684 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 SPRY3O43610 288 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 SEMG1P04279 462 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 PIK3IP1Q96FE7 263 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 TEX101Q9BY14 249 aa9.53□□□□□ -0.88
CLIP1-209ENST00000537178 FCN1O00602 326 aa9.52□□□□□ -0.88
CLIP1-209ENST00000537178 GPANK1O95872 356 aa9.52□□□□□ -0.88
CLIP1-209ENST00000537178 CD96P40200 585 aa9.52□□□□□ -0.88
CLIP1-209ENST00000537178 GALR1P47211 349 aa9.52□□□□□ -0.88
CLIP1-209ENST00000537178 SLC37A1P57057 533 aa9.52□□□□□ -0.88
CLIP1-209ENST00000537178 MAMSTRQ6ZN01 415 aa9.52□□□□□ -0.88
CLIP1-209ENST00000537178 ANGPTL6Q8NI99 470 aa9.52□□□□□ -0.88
CLIP1-209ENST00000537178 DOK1Q99704 481 aa9.52□□□□□ -0.88
CLIP1-209ENST00000537178 GSX1Q9H4S2 264 aaPredicted RBP9.52□□□□□ -0.88
CLIP1-209ENST00000537178 LILRA5A6NI73 299 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 KIAA1324LA8MWY0 1029 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-209ENST00000537178 RAG2P55895 527 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 GFRALQ6UXV0 394 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 IL36GQ9NZH8 169 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 LRP12Q9Y561 859 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 MMP24Q9Y5R2 645 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 EVPLQ92817 2033 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 GLULP15104 373 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 GPR3P46089 330 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 RPL34P49207 117 aaKnown RBP9.52□□□□□ -0.89
CLIP1-209ENST00000537178 SLC25A1P53007 311 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 GUCA2AQ02747 115 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 SPATA46Q5T0L3 261 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 OR13G1Q8NGZ3 307 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 ORAI1Q96D31 301 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 LINC00615Q96LM1 132 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-209ENST00000537178 SARGQ9BW04 601 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 SLC35B3Q9H1N7 401 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 TMEM9BQ9NQ34 198 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 BET1LQ9NYM9 111 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 OTOFQ9HC10 1997 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 ZP3P21754 424 aa9.52□□□□□ -0.89
CLIP1-209ENST00000537178 TGFBR1P36897 503 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms