RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 TAF9Q16594 264 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 EIF5AL1Q6IS14 154 aaKnown RBP11.55□□□□□ -0.56
CAPN1-202ENST00000524773 RPUSD3Q6P087 351 aaKnown RBP11.55□□□□□ -0.56
CAPN1-202ENST00000524773 C17orf78Q8N4C9 275 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 OR56B1Q8NGI3 324 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 SHDQ96IW2 340 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 LYZL4Q96KX0 146 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 OCSTAMPQ9BR26 566 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 OR51M1Q9H341 326 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 FAM86C1Q9NVL1 165 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 ZDHHC8Q9ULC8 765 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 KPTNQ9Y664 436 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 OR5H15A6NDH6 313 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 IGHV2-5P01817 119 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 IGHMP01871 453 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 S100A8P05109 93 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 KLK3P07288 261 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-202ENST00000524773 PET100P0DJ07 73 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 TBPP20226 339 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 GALNSP34059 522 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 LTBRP36941 435 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 ACTBL2Q562R1 376 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 OR2B11Q5JQS5 317 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 ZNF529Q6P280 563 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 ZNF600Q6ZNG1 722 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 MARS2Q96GW9 593 aaKnown RBP11.54□□□□□ -0.56
CAPN1-202ENST00000524773 PAPOLGQ9BWT3 736 aaKnown RBP11.54□□□□□ -0.56
CAPN1-202ENST00000524773 IGHV3-15A0A0B4J1V0 119 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 A6NIZ1 184 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 SPINK2P20155 84 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 PLA2G5P39877 138 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 ARL4DP49703 201 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 RAP1BP61224 184 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 RAP1AP62834 184 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 GABREP78334 506 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 HAGHQ16775 308 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 MEX3BQ6ZN04 569 aaKnown RBP11.54□□□□□ -0.56
CAPN1-202ENST00000524773 OR1N1Q8NGS0 311 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 KLHDC7BQ96G42 594 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 OR5B2Q96R09 309 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 C19orf12Q9NSK7 152 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 PLEKHJ1Q9NW61 149 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 STARD10Q9Y365 291 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 LRP4O75096 1905 aa11.54□□□□□ -0.56
CAPN1-202ENST00000524773 ONECUT2O95948 504 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 QDPRP09417 244 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 P4HA3Q7Z4N8 544 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 LURAP1LQ8IV03 231 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 ZFP62Q8NB50 900 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-202ENST00000524773 OR2AE1Q8NHA4 323 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 PFDN5Q99471 154 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 URM1Q9BTM9 101 aaKnown RBP11.53□□□□□ -0.56
CAPN1-202ENST00000524773 C1orf123Q9NWV4 160 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 KLRF1Q9NZS2 232 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 DNAJB11Q9UBS4 358 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 HS3ST3A1Q9Y663 406 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 ZNF850A8MQ14 1090 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 PPIHO43447 177 aaKnown RBP11.53□□□□□ -0.56
CAPN1-202ENST00000524773 JTBO76095 146 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 OR2C1O95371 312 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 MDKP21741 143 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-202ENST00000524773 EIF2S3P41091 472 aaKnown RBP11.53□□□□□ -0.56
CAPN1-202ENST00000524773 RPS23P62266 143 aaKnown RBP11.53□□□□□ -0.56
CAPN1-202ENST00000524773 HSD11B2P80365 405 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 TLE1Q04724 770 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 KIAA0141Q14154 515 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-202ENST00000524773 PYY3Q5JQD4 70 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 SGPP2Q8IWX5 399 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 PGAM5Q96HS1 289 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 MAGT1Q9H0U3 335 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 KCNJ16Q9NPI9 418 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 METTL1Q9UBP6 276 aaKnown RBP11.53□□□□□ -0.56
CAPN1-202ENST00000524773 WNT16Q9UBV4 365 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 PADI1Q9ULC6 663 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 MEMO1Q9Y316 297 aa11.53□□□□□ -0.56
CAPN1-202ENST00000524773 LIPT2A6NK58 231 aa11.52□□□□□ -0.56
CAPN1-202ENST00000524773 H0YL77 283 aa11.52□□□□□ -0.56
CAPN1-202ENST00000524773 AP4M1O00189 453 aa11.52□□□□□ -0.56
CAPN1-202ENST00000524773 FBLP22087 321 aaKnown RBP11.52□□□□□ -0.56
CAPN1-202ENST00000524773 HAAOP46952 286 aa11.52□□□□□ -0.56
CAPN1-202ENST00000524773 SMAD4Q13485 552 aaKnown RBP11.52□□□□□ -0.56
CAPN1-202ENST00000524773 UNQ6494/PRO21346Q6UXR6 183 aa11.52□□□□□ -0.56
CAPN1-202ENST00000524773 MFSD8Q8NHS3 518 aa11.52□□□□□ -0.56
CAPN1-202ENST00000524773 STT3BQ8TCJ2 826 aa11.52□□□□□ -0.56
CAPN1-202ENST00000524773 EMG1Q92979 244 aaKnown RBP11.52□□□□□ -0.56
CAPN1-202ENST00000524773 GPR173Q9NS66 373 aa11.52□□□□□ -0.56
CAPN1-202ENST00000524773 FAM212BQ9NTI7 297 aaPredicted RBP11.52□□□□□ -0.56
CAPN1-202ENST00000524773 CD207Q9UJ71 328 aa11.52□□□□□ -0.56
CAPN1-202ENST00000524773 COL6A3P12111 3177 aa11.52□□□□□ -0.56
CAPN1-202ENST00000524773 RNF4P78317 190 aa11.52□□□□□ -0.57
CAPN1-202ENST00000524773 C4orf17Q53FE4 359 aa11.52□□□□□ -0.57
CAPN1-202ENST00000524773 COL13A1Q5TAT6 717 aaPredicted RBP11.52□□□□□ -0.57
CAPN1-202ENST00000524773 DEGS2Q6QHC5 323 aa11.52□□□□□ -0.57
CAPN1-202ENST00000524773 SPNS3Q6ZMD2 512 aa11.52□□□□□ -0.57
CAPN1-202ENST00000524773 MR1Q95460 341 aa11.52□□□□□ -0.57
CAPN1-202ENST00000524773 FAM230AA0A1W2PPH8 454 aa11.52□□□□□ -0.57
CAPN1-202ENST00000524773 RNF224P0DH78 156 aa11.52□□□□□ -0.57
CAPN1-202ENST00000524773 OR5H8P0DN80 308 aa11.52□□□□□ -0.57
CAPN1-202ENST00000524773 SMRP1Q8NCR6 262 aa11.52□□□□□ -0.57
CAPN1-202ENST00000524773 TCTEX1D2Q8WW35 142 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms