RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 ENKURQ8TC29 256 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 S100PBPQ96BU1 408 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 MSANTD3Q96H12 275 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 C20orf144Q9BQM9 153 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 SULT4A1Q9BR01 284 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 SIKE1Q9BRV8 207 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 VCXQ9H320 206 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 C1orf198Q9H425 327 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 HEBP1Q9NRV9 189 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 RMND1Q9NWS8 449 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 IFNKQ9P0W0 207 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 ACOT9Q9Y305 439 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 NHSL1Q5SYE7 1610 aa2.71□□□□□ -1.98
HMGB1P1-201ENST00000522557 AK9Q5TCS8 1911 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 TECPR2O15040 1411 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 SSH2Q76I76 1423 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 ANKARQ7Z5J8 1434 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 IGHV6-1A0A0B4J1U7 121 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 GATCO43716 136 aaKnown RBP2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 CDC40O60508 579 aaKnown RBP eCLIP2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 ZMPSTE24O75844 475 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 MUC1P15941 1255 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 HTR2CP28335 458 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 LCN1P31025 176 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 SLC35A1P78382 337 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 LRRC63Q05C16 580 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 ST3GAL4Q11206 333 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 CDC20Q12834 499 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 MOBPQ13875 183 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 PTGES3Q15185 160 aaKnown RBP2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 PSG3Q16557 428 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 NDUFAF6Q330K2 333 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 LINC00483Q53H64 154 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 SNX20Q7Z614 316 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 ST13P4Q8IZP2 240 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 ZNF645Q8N7E2 425 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 UBAC2Q8NBM4 344 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 LINC01560Q8TB33 94 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 FOPNLQ96NB1 174 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 TSNAXQ99598 290 aaKnown RBP2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 SYT4Q9H2B2 425 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 ZNF302Q9NR11 478 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 NECAP2Q9NVZ3 263 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 DDIT4Q9NX09 232 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 FLVCR2Q9UPI3 526 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 HES2Q9Y543 173 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 LOXHD1Q8IVV2 1947 aa2.7□□□□□ -1.98
HMGB1P1-201ENST00000522557 OVOS2A0A0G2JMS6 1433 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 OVOS2A0A0J9YW53 1432 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 OVOS2Q6IE36 1432 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 OR5H1A6NKK0 313 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 M0R1B8 84 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 NEMFO60524 1076 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 UPK1BO75841 260 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 IGKV1D-16P01601 117 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 MT-ND4P03905 459 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 C1GALT1C1LP0DN25 315 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 PAX6P26367 422 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 ARL2P36404 184 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 GALR1P47211 349 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 KCNJ3P48549 501 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 TAS2R60P59551 318 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 CYP24A1Q07973 514 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 C16orf72Q14CZ0 275 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 MAD2L1BPQ15013 274 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 TNXAQ16473 311 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 PRSS8Q16651 343 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 TEX30Q5JUR7 227 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 COPS6Q7L5N1 327 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 ZCCHC24Q8N2G6 241 aaKnown RBP2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 SPERTQ8NA61 448 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 OR1J4Q8NGS1 313 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 LGALS14Q8TCE9 139 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 ZFAND1Q8TCF1 268 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 FRZBQ92765 325 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 GHSRQ92847 366 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 RNF170Q96K19 258 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 ZNF382Q96SR6 550 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 KCNS3Q9BQ31 491 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 SFXN3Q9BWM7 321 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 EXOSC4Q9NPD3 245 aaKnown RBP2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 SIRT7Q9NRC8 400 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 AGPAT3Q9NRZ7 376 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 V9GYY9 64 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 CPDO75976 1380 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 MAP3K5Q99683 1374 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 NRXN1Q9ULB1 1477 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 GCC2Q8IWJ2 1684 aa2.69□□□□□ -1.98
HMGB1P1-201ENST00000522557 CRB1P82279 1406 aa2.68□□□□□ -1.98
HMGB1P1-201ENST00000522557 XRN1Q8IZH2 1706 aaKnown RBP2.68□□□□□ -1.98
HMGB1P1-201ENST00000522557 BRWD3Q6RI45 1802 aa2.68□□□□□ -1.98
HMGB1P1-201ENST00000522557 MYO5BQ9ULV0 1848 aa2.68□□□□□ -1.98
HMGB1P1-201ENST00000522557 TRAV19A0A0A6YYK7 116 aa2.68□□□□□ -1.98
HMGB1P1-201ENST00000522557 LOC100506127A0A0U1RQW1 187 aa2.68□□□□□ -1.98
HMGB1P1-201ENST00000522557 ZNF233A6NK53 670 aa2.68□□□□□ -1.98
HMGB1P1-201ENST00000522557 ZNF879B4DU55 563 aa2.68□□□□□ -1.98
HMGB1P1-201ENST00000522557 E7EWF7 191 aa2.68□□□□□ -1.98
HMGB1P1-201ENST00000522557 NDUFC2-KCTD14E9PQ53 114 aa2.68□□□□□ -1.98
HMGB1P1-201ENST00000522557 M0QX08 132 aa2.68□□□□□ -1.98
HMGB1P1-201ENST00000522557 UPK1AO00322 258 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms