RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 IRGMA1A4Y4 181 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 NKX6-3A6NJ46 265 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 OR2AT4A6NND4 320 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 XPNPEP2O43895 674 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 GATBO75879 557 aaKnown RBP11.59□□□□□ -0.55
DDX41-212ENST00000511040 INMTO95050 263 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 ZFPL1O95159 310 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 DCKP27707 260 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 GABRA2P47869 451 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 NPY4RP50391 375 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 XAF1Q6GPH4 301 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 BTN2A1Q7KYR7 527 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 SLC36A1Q7Z2H8 476 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 CALHM1Q8IU99 346 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 TEX29Q8N6K0 151 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 POC1AQ8NBT0 407 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 TFAP2CQ92754 450 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 GGHQ92820 318 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 C12orf43Q96C57 262 aaKnown RBP11.59□□□□□ -0.55
DDX41-212ENST00000511040 GAFA1Q96PS6 74 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 PDCD1LG2Q9BQ51 273 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 JAM3Q9BX67 310 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 KAAG1Q9UBP8 84 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 HHLA2Q9UM44 414 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 HSPE1-MOB4S4R3N1 261 aa11.59□□□□□ -0.55
DDX41-212ENST00000511040 IGKV1D-17A0A075B6S4 117 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 IGKV1-9A0A0C4DH69 117 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 TRBV2A0A0J9YWF9 115 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 RNF212BA8MTL3 300 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 H0YHG0 523 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 NDUFB3O43676 98 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 ENSAO43768 121 aaKnown RBP11.58□□□□□ -0.56
DDX41-212ENST00000511040 SERPINA3P01011 423 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 FSHBP01225 129 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 PSG2P11465 335 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 ATF1P18846 271 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 MYL12AP19105 171 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 TGM4P49221 684 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 FGF12P61328 243 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 DGUOKQ16854 277 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 KLF17Q5JT82 389 aaPredicted RBP11.58□□□□□ -0.56
DDX41-212ENST00000511040 CD276Q5ZPR3 534 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 TMPRSS11AQ6ZMR5 421 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 ACP7Q6ZNF0 438 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 BPIFB6Q8NFQ5 453 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 OR5AK2Q8NH90 309 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 ANGPTL6Q8NI99 470 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 TMEM80Q96HE8 168 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 SLC6A7Q99884 636 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 DIMT1Q9UNQ2 313 aaKnown RBP11.58□□□□□ -0.56
DDX41-212ENST00000511040 POLDIP2Q9Y2S7 368 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 MXRA5Q9NR99 2828 aa11.58□□□□□ -0.56
DDX41-212ENST00000511040 FBN1P35555 2871 aaKnown RBP11.57□□□□□ -0.56
DDX41-212ENST00000511040 TCF21O43680 179 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 NXPH2O95156 264 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 CCDC159P0C7I6 412 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 PGA5P0DJD9 388 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 IGHV4-38-2P0DP08 117 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 CEBPDP49716 269 aaPredicted RBP11.57□□□□□ -0.56
DDX41-212ENST00000511040 FUT6P51993 359 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 ST3GAL4Q11206 333 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 MRPL28Q13084 256 aaKnown RBP11.57□□□□□ -0.56
DDX41-212ENST00000511040 CNN3Q15417 329 aaKnown RBP11.57□□□□□ -0.56
DDX41-212ENST00000511040 ATPAF1Q5TC12 328 aaPredicted RBP11.57□□□□□ -0.56
DDX41-212ENST00000511040 ZNF788Q6ZQV5 615 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 AHSA2Q719I0 299 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 BCL6BQ8N143 479 aaPredicted RBP11.57□□□□□ -0.56
DDX41-212ENST00000511040 FBLIM1Q8WUP2 373 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 GATAD2BQ8WXI9 593 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 PP6455Q8WZ26 134 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 H1FXQ92522 213 aaKnown RBP11.57□□□□□ -0.56
DDX41-212ENST00000511040 SLAMF9Q96A28 289 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 RFT1Q96AA3 541 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 C10orf35Q96D05 121 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 BORCS8Q96FH0 119 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 NRIP2Q9BQI9 281 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 COMMD4Q9H0A8 199 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 ELL3Q9HB65 397 aaPredicted RBP11.57□□□□□ -0.56
DDX41-212ENST00000511040 ZNF69Q9UC07 566 aa11.57□□□□□ -0.56
DDX41-212ENST00000511040 CAB39Q9Y376 341 aaPredicted RBP11.57□□□□□ -0.56
DDX41-212ENST00000511040 EXOSC1Q9Y3B2 195 aaKnown RBP11.57□□□□□ -0.56
DDX41-212ENST00000511040 SOX21Q9Y651 276 aaPredicted RBP11.57□□□□□ -0.56
DDX41-212ENST00000511040 SIRT4Q9Y6E7 314 aaPredicted RBP11.57□□□□□ -0.56
DDX41-212ENST00000511040 TRAV40A0A0B4J280 105 aa11.56□□□□□ -0.56
DDX41-212ENST00000511040 EFCAB10A6NFE3 127 aa11.56□□□□□ -0.56
DDX41-212ENST00000511040 RFPL4AA6NLU0 287 aa11.56□□□□□ -0.56
DDX41-212ENST00000511040 TMEM212A6NML5 194 aa11.56□□□□□ -0.56
DDX41-212ENST00000511040 RFPL4AL1F8VTS6 287 aa11.56□□□□□ -0.56
DDX41-212ENST00000511040 F8VVB4 439 aa11.56□□□□□ -0.56
DDX41-212ENST00000511040 F8VWA3 439 aa11.56□□□□□ -0.56
DDX41-212ENST00000511040 SIGLEC5O15389 551 aa11.56□□□□□ -0.56
DDX41-212ENST00000511040 SFTPBP07988 381 aa11.56□□□□□ -0.56
DDX41-212ENST00000511040 ACAA1P09110 424 aaPredicted RBP11.56□□□□□ -0.56
DDX41-212ENST00000511040 OCM2P0CE71 109 aa11.56□□□□□ -0.56
DDX41-212ENST00000511040 OCMP0CE72 109 aaPredicted RBP11.56□□□□□ -0.56
DDX41-212ENST00000511040 NDUFB7P17568 137 aa11.56□□□□□ -0.56
DDX41-212ENST00000511040 MPZP25189 248 aa11.56□□□□□ -0.56
DDX41-212ENST00000511040 AZGP1P25311 298 aaKnown RBP11.56□□□□□ -0.56
DDX41-212ENST00000511040 SOX2P48431 317 aa11.56□□□□□ -0.56
DDX41-212ENST00000511040 POU3F4P49335 361 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms