RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ZNF593O00488 134 aaPredicted RBP4.77□□□□□ -1.65
GYPB-204ENST00000504951 CDIPTO14735 213 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 TBX1O43435 398 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 IDH3BO43837 385 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 PGA5P0DJD9 388 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 ACKR3P25106 362 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 CX3CR1P49238 355 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 ENTPD1P49961 510 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 ZNF121P58317 390 aaPredicted RBP4.77□□□□□ -1.65
GYPB-204ENST00000504951 PPP1R8Q12972 351 aaKnown RBP4.77□□□□□ -1.65
GYPB-204ENST00000504951 TSPAN31Q12999 210 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 KRT72Q14CN4 511 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 C9orf66Q5T8R8 295 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 LINC01590Q5TEZ4 76 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 CCDC121Q6ZUS5 278 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 DPY19L4Q7Z388 723 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 EGFL6Q8IUX8 553 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 MKXQ8IYA7 352 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 DYNAPQ8N1N2 210 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 OSR2Q8N2R0 312 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 FAM71E2Q8N5Q1 922 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 COMMD1Q8N668 190 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 OR2T4Q8NH00 348 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 GNPDA2Q8TDQ7 276 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 H1FXQ92522 213 aaKnown RBP4.77□□□□□ -1.65
GYPB-204ENST00000504951 RPL3LQ92901 407 aaKnown RBP4.77□□□□□ -1.65
GYPB-204ENST00000504951 REEP6Q96HR9 211 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 NMNAT2Q9BZQ4 307 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 MYLK2Q9H1R3 596 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 CCDC134Q9H6E4 229 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 ZMAT4Q9H898 229 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 GORASP2Q9H8Y8 452 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 MED20Q9H944 212 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 ABCB9Q9NP78 766 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 KRCC1Q9NPI7 259 aaPredicted RBP4.77□□□□□ -1.65
GYPB-204ENST00000504951 ZNF446Q9NWS9 450 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 TAS2R1Q9NYW7 299 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 IL20Q9NYY1 176 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 USE1Q9NZ43 259 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 ZNF391Q9UJN7 358 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 ZNF222Q9UK12 451 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 SAMD4AQ9UPU9 718 aaKnown RBP4.77□□□□□ -1.65
GYPB-204ENST00000504951 CDH10Q9Y6N8 788 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 HECTD4Q9Y4D8 3996 aa4.77□□□□□ -1.65
GYPB-204ENST00000504951 FRAS1Q86XX4 4008 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 SORL1Q92673 2214 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 A0A1W2PQ09 198 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 FAM183AA6NL82 134 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 ZNF850A8MQ14 1090 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 ZNF878C9JN71 531 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 M0QZK8 103 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 ARPC2O15144 300 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 AKR7A2O43488 359 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 XRCC2O43543 280 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 CCDC22O60826 627 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 JTBO76095 146 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 SOX14O95416 240 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 GASTP01350 101 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 ANXA2P07355 339 aaKnown RBP4.76□□□□□ -1.65
GYPB-204ENST00000504951 SPI1P17947 270 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 CFL1P23528 166 aaKnown RBP4.76□□□□□ -1.65
GYPB-204ENST00000504951 FMO3P31513 532 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 DCTDP32321 178 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 RAB13P51153 203 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 HMGA2P52926 109 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 DLX6P56179 175 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 RPL23AP62750 156 aaKnown RBP4.76□□□□□ -1.65
GYPB-204ENST00000504951 EIF2B1Q14232 305 aaKnown RBP4.76□□□□□ -1.65
GYPB-204ENST00000504951 TAF13Q15543 124 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 TIGD6Q17RP2 521 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 GFOD2Q3B7J2 385 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 TEX30Q5JUR7 227 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 TMEM200BQ69YZ2 307 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 LCN8Q6JVE9 175 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 KCTD18Q6PI47 426 aaPredicted RBP4.76□□□□□ -1.65
GYPB-204ENST00000504951 FAM57BQ71RH2 274 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 SBSPONQ8IVN8 264 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 ZNRF1Q8ND25 227 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 CSNK2A3Q8NEV1 391 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 OR4C15Q8NGM1 316 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 OR13D1Q8NGV5 346 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 OR6K6Q8NGW6 343 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 HPSE2Q8WWQ2 592 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 OR5P3Q8WZ94 311 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 TFAP2CQ92754 450 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 HRASLS5Q96KN8 279 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 LYZL4Q96KX0 146 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 OR5M11Q96RB7 305 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 TM2D3Q9BRN9 247 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 ABHD6Q9BV23 337 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 PAPOLGQ9BWT3 736 aaKnown RBP4.76□□□□□ -1.65
GYPB-204ENST00000504951 TSSK6Q9BXA6 273 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 SP140LQ9H930 580 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 SPAG4Q9NPE6 437 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 IL1RAPQ9NPH3 570 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 MBNL3Q9NUK0 354 aaKnown RBP4.76□□□□□ -1.65
GYPB-204ENST00000504951 ARMC1Q9NVT9 282 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 GAR1Q9NY12 217 aaKnown RBP4.76□□□□□ -1.65
GYPB-204ENST00000504951 RASL12Q9NYN1 266 aa4.76□□□□□ -1.65
GYPB-204ENST00000504951 DNAJC27Q9NZQ0 273 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms