RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 DMBX1Q8NFW5 382 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR4N2Q8NGD1 307 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR52H1Q8NGJ2 320 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR52B4Q8NGK2 314 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR5M1Q8NGP8 315 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR1J2Q8NGS2 313 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR13C5Q8NGS8 318 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR10R2Q8NGX6 335 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR6N2Q8NGY6 317 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR2AJ1Q8NGZ0 328 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR8S1Q8NH09 359 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR4K15Q8NH41 348 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 MFSD8Q8NHS3 518 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 LYPD6BQ8NI32 183 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 STOML3Q8TAV4 291 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 GPR119Q8TDV5 335 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 GRHL3Q8TE85 626 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 DUSP19Q8WTR2 217 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 PPP1R1CQ8WVI7 109 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 TCTEX1D2Q8WW35 142 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 METTL21AQ8WXB1 218 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR1E3Q8WZA6 343 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 DAZLQ92904 295 aaKnown RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 EMG1Q92979 244 aaKnown RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ARL11Q969Q4 196 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 TSACCQ96A04 125 aaPredicted RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 FAM46BQ96A09 425 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ADIPOR1Q96A54 375 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 FGGYQ96C11 551 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 C8orf44Q96CB5 159 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 INTS12Q96CB8 462 aaKnown RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 RNF183Q96D59 192 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ARSGQ96EG1 525 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 PIK3IP1Q96FE7 263 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 SLC25A44Q96H78 314 aaPredicted RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 SMIM8Q96KF7 97 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CAPNS2Q96L46 248 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 SGCZQ96LD1 299 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ZNF285Q96NJ3 590 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 TSSK2Q96PF2 358 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CDCA3Q99618 268 aaPredicted RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 LPAR4Q99677 370 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 MAP3K3Q99759 626 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CMKLR1Q99788 373 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 SLC6A7Q99884 636 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 GABRG3Q99928 467 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 URM1Q9BTM9 101 aaKnown RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ABHD6Q9BV23 337 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ZNF471Q9BX82 626 aaPredicted RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 PLA2G2FQ9BZM2 168 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 FXYD6Q9H0Q3 95 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 TLNRD1Q9H1K6 362 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 SLC26A1Q9H2B4 701 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 MTIF3Q9H2K0 278 aaKnown RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 METTL8Q9H825 291 aaKnown RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 PLEKHA2Q9HB19 425 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CHMP1AQ9HD42 196 aaPredicted RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 PDE7BQ9NP56 450 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 RAB18Q9NP72 206 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 PRMT8Q9NR22 394 aaPredicted RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 MMP26Q9NRE1 261 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 SMCO4Q9NRQ5 59 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CYTL1Q9NRR1 136 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 SERINC1Q9NRX5 453 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CA10Q9NS85 328 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 UQCC1Q9NVA1 299 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 HPF1Q9NWY4 346 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR6C3Q9NZP0 311 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 OR52A1Q9UKL2 312 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 IKZF2Q9UKS7 526 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 VDAC3Q9Y277 283 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 B3GALT5Q9Y2C3 310 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 RPH3AQ9Y2J0 694 aaPredicted RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 CARHSP1Q9Y2V2 147 aaKnown RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 MEMO1Q9Y316 297 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 PRELID3BQ9Y3B1 194 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 NOP16Q9Y3C1 178 aaKnown RBP1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 ADAM18Q9Y3Q7 739 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 MMACHCQ9Y4U1 282 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 R4GMQ9 66 aa1.78□□□□□ -2.12
SNRNP40-207ENST00000491106 C2orf16Q68DN1 1984 aa1.78□□□□□ -2.13
SNRNP40-207ENST00000491106 PTPRSQ13332 1948 aa1.78□□□□□ -2.13
SNRNP40-207ENST00000491106 DNAH12Q6ZR08 3092 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 IGKV1D-42A0A075B6H8 117 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 TRAV8-7A0A075B6U6 113 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 A0A0A0MQY5 61 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 TNFSF12-TNFSF13A0A0A6YY99 330 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 TMED7-TICAM2A0A0A6YYA0 188 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 A0A0A6YYC8 382 aaPredicted RBP1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 NPIPA5A0A0B4J1W7 369 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 IGHV4-28A0A0C4DH34 117 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 SPTY2D1-AS1A0A0U1RR47 76 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 A0A1B0GTH9 108 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 A0A1B0GW64 132 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 A0A1W2PQF6 199 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 FRG2CA6NGY1 282 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 C5orf52A6NGY3 159 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF726A6NNF4 738 aa1.77□□□□□ -2.13
SNRNP40-207ENST00000491106 A8MUA0 341 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms