RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 CD59P13987 128 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 SNU13P55769 128 aaKnown RBP8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 MTCP1P56278 107 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 CLDN15P56746 228 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 CYCSP99999 105 aaKnown RBP8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 PSG4Q00888 419 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 FOXO1Q12778 655 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 SURF2Q15527 256 aaPredicted RBP8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 CHRFAM7AQ494W8 412 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 TMEM128Q5BJH2 165 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 C11orf87Q6NUJ2 197 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 GALNTL5Q7Z4T8 443 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 C1QL2Q7Z5L3 287 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 PEG10Q86TG7 708 aaKnown RBP8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 LHFPL1Q86WI0 220 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 OR2AE1Q8NHA4 323 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 COQ8AQ8NI60 647 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 PCNPQ8WW12 178 aaKnown RBP8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 EMG1Q92979 244 aaKnown RBP8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 RBPMSQ93062 196 aaKnown RBP8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 BORCS8Q96FH0 119 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 SLX1AQ9BQ83 275 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 FN3KRPQ9HA64 309 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 PARPBPQ9NWS1 579 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 RDH8Q9NYR8 311 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 EHFQ9NZC4 300 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ZNF230Q9UIE0 474 aaPredicted RBP8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 GPR132Q9UNW8 380 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 C14orf166Q9Y224 244 aaKnown RBP8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 OSGIN2Q9Y236 505 aa8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 NOSIPQ9Y314 301 aaKnown RBP8.32□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ZNF816-ZNF321PA0A0X1KG74 233 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 hCG_38984A0A1B0GV85 526 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 FAM230AA0A1W2PPH8 454 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 C5orf51A6NDU8 294 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 F8W735 103 aaPredicted RBP8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 MRPL33O75394 65 aaKnown RBP8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 F10P00742 488 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 NMBP08949 121 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 PGAM2P15259 253 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 GABRR1P24046 479 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ACKR3P25106 362 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ITGA3P26006 1051 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 RBP2P50120 134 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 NPY4RP50391 375 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 LHX2P50458 406 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ATP1B3P54709 279 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ARPC4P59998 168 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 PLGLB1Q02325 96 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 HGFACQ04756 655 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 AIMP2Q13155 320 aaKnown RBP8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 OR1C1Q15619 314 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 PLEKHN1Q494U1 663 aaPredicted RBP8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 TMEM42Q69YG0 159 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ZNF660Q6AZW8 331 aaPredicted RBP8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ALKAL2Q6UX46 152 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ACOT7LQ6ZUV0 252 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 PDZD9Q8IXQ8 264 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 INO80EQ8NBZ0 244 aaPredicted RBP8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ABHD3Q8WU67 409 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 PPP1R1CQ8WVI7 109 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ST8SIA2Q92186 375 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 TMEM230Q96A57 120 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ZNF845Q96IR2 970 aaPredicted RBP8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 VRK1Q99986 396 aaPredicted RBP8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ST6GALNAC5Q9BVH7 336 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 RAB18Q9NP72 206 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 PCDHB16Q9NRJ7 776 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ZNF701Q9NV72 531 aaPredicted RBP8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 MCTS1Q9ULC4 181 aaKnown RBP8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 HSF4Q9ULV5 492 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 EDARQ9UNE0 448 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 TECTAO75443 2155 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 LAMA1P25391 3075 aa8.31□□□□□ -1.08
RAB3GAP1-205ENST00000489858 PRUNE2Q8WUY3 3088 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 DBX1A6NMT0 343 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 EEF1E1-BLOC1S5C9J1V9 151 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ZNF587BE7ETH6 402 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 NEURL1O76050 574 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 SPDEFO95238 335 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 NRASP01111 189 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 CRHP06850 196 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 MMP7P09237 267 aaPredicted RBP8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ZP3P21754 424 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 DTYMKP23919 212 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 NTF4P34130 210 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 SERPINF1P36955 418 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 NUP62P37198 522 aaPredicted RBP8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 FUT6P51993 359 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 CLDN18P56856 261 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ARF1P84077 181 aaKnown RBP8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ATXN7L3Q14CW9 347 aaPredicted RBP8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 OR8B8Q15620 311 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 LRRC37A5PQ49AS3 106 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 DCAF10Q5QP82 559 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 PLCXD3Q63HM9 321 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 SPINK14Q6IE38 97 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 ASCL4Q6XD76 172 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 Q6ZS46 218 aa8.3□□□□□ -1.08
RAB3GAP1-205ENST00000489858 DTX1Q86Y01 620 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms