RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 CTRB2Q6GPI1 263 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 UNQ9370/PRO34162Q6UXP9 181 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 PRSS45Q7RTY3 260 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 C17orf78Q8N4C9 275 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 ASCC1Q8N9N2 400 aaKnown RBP5.46□□□□□ -1.54
HDAC1-205ENST00000472928 CPEB3Q8NE35 698 aaKnown RBP5.46□□□□□ -1.54
HDAC1-205ENST00000472928 OR1J2Q8NGS2 313 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 OR2AE1Q8NHA4 323 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 GRPEL2Q8TAA5 225 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 PHYHIPQ92561 330 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 FAM71F1Q96KD3 344 aaPredicted RBP5.46□□□□□ -1.54
HDAC1-205ENST00000472928 TRAF4Q9BUZ4 470 aaPredicted RBP5.46□□□□□ -1.54
HDAC1-205ENST00000472928 ACTR6Q9GZN1 396 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 SLITRK2Q9H156 845 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 OR10A2Q9H208 303 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 SLA2Q9H6Q3 261 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 PLEKHA1Q9HB21 404 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 BARX1Q9HBU1 254 aaPredicted RBP5.46□□□□□ -1.54
HDAC1-205ENST00000472928 NEK6Q9HC98 313 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 TCF7L1Q9HCS4 588 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 PLSCR4Q9NRQ2 329 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 TAS2R4Q9NYW5 299 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 CKLFQ9UBR5 152 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 GPR160Q9UJ42 338 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 RNF115Q9Y4L5 304 aa5.46□□□□□ -1.54
HDAC1-205ENST00000472928 TRAV8-7A0A075B6U6 113 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 LOC100509620A0A075B734 347 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 TRAV1-2A0A0B4J238 106 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 A0A0G2JK05 382 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 A0A0U1RQV5 110 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 A0A1B0GTI1 187 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 OR5H1A6NKK0 313 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 PDCD5O14737 125 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 SSX4O60224 188 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 RNASE1P07998 156 aaKnown RBP5.45□□□□□ -1.54
HDAC1-205ENST00000472928 CELA3BP08861 270 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 CCL2P13500 99 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 RAC2P15153 192 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 CCL1P22362 96 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 CCNOP22674 350 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 CD40LGP29965 261 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 PPP3R1P63098 170 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 P2RY6Q15077 328 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 TBC1D28Q2M2D7 210 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 RSPO1Q2MKA7 263 aaPredicted RBP5.45□□□□□ -1.54
HDAC1-205ENST00000472928 ZNF672Q499Z4 452 aaPredicted RBP5.45□□□□□ -1.54
HDAC1-205ENST00000472928 GLYATL3Q5SZD4 288 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 NCMAPQ5T1S8 102 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 CYB5R2Q6BCY4 276 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 SFXN4Q6P4A7 337 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 DOK3Q7L591 496 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 DTX2Q86UW9 622 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 NAA40Q86UY6 237 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 MYPOPQ86VE0 399 aaPredicted RBP5.45□□□□□ -1.54
HDAC1-205ENST00000472928 TPRA1Q86W33 373 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 NR2C2APQ86WQ0 139 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 ZNF584Q8IVC4 421 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 CCDC36Q8IYA8 594 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 PAQR4Q8N4S7 273 aaPredicted RBP5.45□□□□□ -1.54
HDAC1-205ENST00000472928 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.45□□□□□ -1.54
HDAC1-205ENST00000472928 SLC30A7Q8NEW0 376 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 OR52H1Q8NGJ2 320 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 AP3S1Q92572 193 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 REEP6Q96HR9 211 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 LYZL4Q96KX0 146 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 SOX7Q9BT81 388 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 OR10A4Q9H209 315 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 CDH20Q9HBT6 801 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 B3GNT2Q9NY97 397 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 ZNF319Q9P2F9 582 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 AMDHD2Q9Y303 409 aa5.45□□□□□ -1.54
HDAC1-205ENST00000472928 A0A0B4J203 849 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 hCG_38984A0A1B0GV85 526 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 ANKRD61A6NGH8 418 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 A6NIN4 97 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 FAM25AB3EWG3 89 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 FAM25CB3EWG5 89 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 FAM25GB3EWG6 89 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 RGS5O15539 181 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 XRCC2O43543 280 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 DHRS3O75911 302 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 IGLV3-1P01715 115 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 MAS1P04201 325 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 SERPINA5P05154 406 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 SLC2A2P11168 524 aaPredicted RBP5.44□□□□□ -1.54
HDAC1-205ENST00000472928 FAHP16930 419 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 ZNF14P17017 642 aaPredicted RBP5.44□□□□□ -1.54
HDAC1-205ENST00000472928 ADRA2CP18825 462 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 ATF1P18846 271 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 SRMP19623 302 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 PSMB1P20618 241 aaKnown RBP5.44□□□□□ -1.54
HDAC1-205ENST00000472928 CFL1P23528 166 aaKnown RBP5.44□□□□□ -1.54
HDAC1-205ENST00000472928 THBS4P35443 961 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 WNT5AP41221 380 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 PPP5CP53041 499 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 AP2S1P53680 142 aaPredicted RBP5.44□□□□□ -1.54
HDAC1-205ENST00000472928 SPOCK1Q08629 439 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 CDK10Q15131 360 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 FAM120AOSQ5T036 256 aa5.44□□□□□ -1.54
HDAC1-205ENST00000472928 IDNKQ5T6J7 187 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms