RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 TUBB1Q9H4B7 451 aa1.97□□□□□ -2.09
XRN1-210ENST00000472697 AMBNQ9NP70 447 aa1.97□□□□□ -2.09
XRN1-210ENST00000472697 MYH8P13535 1937 aa1.97□□□□□ -2.09
XRN1-210ENST00000472697 COL6A3P12111 3177 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 B4DXG7 233 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 SOX15O60248 233 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 CD8AP01732 235 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 GKN3PP0CG01 181 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 GIMD1P0DJR0 217 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 PRSS3P35030 304 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 MYCNOSP40205 109 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 PPICP45877 212 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 IDH2P48735 452 aaKnown RBP1.96□□□□□ -2.1
XRN1-210ENST00000472697 SLC25A1P53007 311 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 RPL32P62910 135 aaKnown RBP1.96□□□□□ -2.1
XRN1-210ENST00000472697 DMC1Q14565 340 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 KRTAP27-1Q3LI81 207 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 OR2B11Q5JQS5 317 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 THEM4Q5T1C6 240 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 HHATQ5VTY9 493 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 MED27Q6P2C8 311 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 TMEM179Q6ZVK1 233 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 MBOAT2Q6ZWT7 520 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 C20orf203Q8NBC4 194 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 GEMIN6Q8WXD5 167 aaKnown RBP1.96□□□□□ -2.1
XRN1-210ENST00000472697 TMEM234Q8WY98 164 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 TMEM158Q8WZ71 300 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 PACRGQ96M98 296 aaPredicted RBP1.96□□□□□ -2.1
XRN1-210ENST00000472697 C18orf15Q96N68 181 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 NXF2Q9GZY0 626 aaKnown RBP1.96□□□□□ -2.1
XRN1-210ENST00000472697 SPNS1Q9H2V7 528 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 AIG1Q9NVV5 245 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 C1orf109Q9NX04 203 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 PSMD13Q9UNM6 376 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 MOKQ9UQ07 419 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 HEBP2Q9Y5Z4 205 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 ALG5Q9Y673 324 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 BRWD1Q9NSI6 2320 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 SPTBN5Q9NRC6 3674 aaKnown RBP1.96□□□□□ -2.1
XRN1-210ENST00000472697 IGKV1-27A0A075B6S5 117 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 SLC5A10A0PJK1 596 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 EPOPA6NHQ4 379 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 H0Y980 276 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 H3BP45 60 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 RP2O75695 350 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 DEXIO95424 95 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 T-ENOLP0DO92 83 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 CALM1P0DP23 149 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 CALM2P0DP24 149 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 CALM3P0DP25 149 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 RPS23P62266 143 aaKnown RBP1.96□□□□□ -2.1
XRN1-210ENST00000472697 PITPNAQ00169 270 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 OR1Q1Q15612 314 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 TMEM249Q2WGJ8 235 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 NIPAL1Q6NVV3 410 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 PAMR1Q6UXH9 720 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 PPP1R27Q86WC6 154 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 SLC30A8Q8IWU4 369 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 CSNK1G2-AS1Q8NCQ2 148 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 OR6K6Q8NGW6 343 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 FAM76AQ8TAV0 307 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 GHSRQ92847 366 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 PIK3IP1Q96FE7 263 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 ARHGDIGQ99819 225 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 WACQ9BTA9 647 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 ZNF426Q9BUY5 554 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 MFSD1Q9H3U5 465 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 VCX3AQ9NNX9 186 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 NKIRAS1Q9NYS0 192 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 CIDEBQ9UHD4 219 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 USP24Q9UPU5 2620 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 PCSK5Q92824 1860 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 MYH1P12882 1939 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 ZFHX2Q9C0A1 2572 aaPredicted RBP1.96□□□□□ -2.1
XRN1-210ENST00000472697 CHD6Q8TD26 2715 aa1.96□□□□□ -2.1
XRN1-210ENST00000472697 GOLGA6L10A6NI86 522 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 LYRM9A8MSI8 78 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 SERPINB7O75635 380 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 OR5F1O95221 314 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 CSF3P09919 207 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 PGAM2P15259 253 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 ZNF30P17039 623 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 AK4P27144 223 aaPredicted RBP1.95□□□□□ -2.1
XRN1-210ENST00000472697 ADORA1P30542 326 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 HOXA9P31269 272 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 ACTR1BP42025 376 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 CDKN2CP42773 168 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 GNG10P50151 68 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 TAS2R46P59540 309 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 OR2B8PP59922 312 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 CHRNB3Q05901 458 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 PAX8Q06710 450 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 ARL6IP1Q15041 203 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 TCEAL5Q5H9L2 206 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 ACP7Q6ZNF0 438 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 MYPOPQ86VE0 399 aaPredicted RBP1.95□□□□□ -2.1
XRN1-210ENST00000472697 KLHL30-AS1Q8NEE0 82 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 OR51D1Q8NGF3 324 aa1.95□□□□□ -2.1
XRN1-210ENST00000472697 CIDECQ96AQ7 238 aaPredicted RBP1.95□□□□□ -2.1
XRN1-210ENST00000472697 TAPBPLQ9BX59 468 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms