RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 TIMD4Q96H15 378 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 PKIBQ9C010 78 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 METTL9Q9H1A3 318 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 RNF167Q9H6Y7 350 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 C1orf123Q9NWV4 160 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 DNAJB11Q9UBS4 358 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 ING4Q9UNL4 249 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 PLEKHA6Q9Y2H5 1048 aa6.89□□□□□ -1.31
HDAC6-216ENST00000468949 MRPS28Q9Y2Q9 187 aaKnown RBP6.89□□□□□ -1.31
HDAC6-216ENST00000468949 ANKRD17O75179 2603 aaKnown RBP6.89□□□□□ -1.31
HDAC6-216ENST00000468949 PRR14LQ5THK1 2151 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 VGLL3A8MV65 326 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 CLDN25C9JDP6 229 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 H3BMQ9 156 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 AIPO00170 330 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 CDIPTO14735 213 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 SPRY1O43609 319 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-216ENST00000468949 CDC14BO60729 498 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 ZNF780AO75290 641 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-216ENST00000468949 NCR1O76036 304 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 NXPH2O95156 264 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 CD8AP01732 235 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 UBBP0CG47 229 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 DAOP14920 347 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 TGFBR1P36897 503 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 GATA4P43694 442 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 OR3A4PP47883 348 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 RORCP51449 518 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 BMXP51813 675 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 EFNA4P52798 201 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 ATP5J2P56134 94 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 OR10A3P58181 314 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 GMFBP60983 142 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 MAB21L1Q13394 359 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 RIN1Q13671 783 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 GPR176Q14439 515 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 CTF1Q16619 201 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 SMIM21Q3B7S5 101 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 IDNKQ5T6J7 187 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 HES5Q5TA89 166 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 ZNF529Q6P280 563 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 SFXN4Q6P4A7 337 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 GLIPR1L1Q6UWM5 242 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 KRT74Q7RTS7 529 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 LRRTM1Q86UE6 522 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 ANGPTL5Q86XS5 388 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 ZCCHC24Q8N2G6 241 aaKnown RBP6.88□□□□□ -1.31
HDAC6-216ENST00000468949 SCCPDHQ8NBX0 429 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 OR51F2Q8NH61 342 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 LRRC29Q8WV35 223 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 CCL17Q92583 94 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 NRGNQ92686 78 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 RDH5Q92781 318 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 SLAMF9Q96A28 289 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 DGCR14Q96DF8 476 aaKnown RBP6.88□□□□□ -1.31
HDAC6-216ENST00000468949 PERPQ96FX8 193 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 CEP19Q96LK0 163 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 CST11Q9H112 138 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 PPIL3Q9H2H8 161 aaKnown RBP6.88□□□□□ -1.31
HDAC6-216ENST00000468949 PPP1R3EQ9H7J1 279 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 CNTD2Q9H8S5 307 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 MYOZ1Q9NP98 299 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-216ENST00000468949 DLL4Q9NR61 685 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 STEAP1Q9UHE8 339 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 GLS2Q9UI32 602 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 DAPK2Q9UIK4 370 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 ITGB1BP2Q9UKP3 347 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 NPTNQ9Y639 398 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 CEPT1Q9Y6K0 416 aa6.88□□□□□ -1.31
HDAC6-216ENST00000468949 OTOGQ6ZRI0 2925 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 PDZD2O15018 2839 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 CADP27708 2225 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 LOC100289279A0A1B0GTE1 492 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 A0A1B0GWJ7 208 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 ISPDA4D126 451 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 IFITM5A6NNB3 132 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 SLC17A2O00624 439 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 TMEM127O75204 238 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 CRTAPO75718 401 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-216ENST00000468949 CSF3P09919 207 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 CLEC2LP0C7M8 214 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 ARSBP15848 533 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 SERPINA2P20848 420 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 GLRA1P23415 457 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 PTGFRP43088 359 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 ART1P52961 327 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 IL24Q13007 206 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 PDZK1IP1Q13113 114 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 SPCS2Q15005 226 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 P2RY14Q15391 338 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 KCNJ8Q15842 424 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 DGUOKQ16854 277 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 SLC22A6Q4U2R8 563 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 ASPHD2Q6ICH7 369 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 MZT2AQ6P582 158 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 CLEC2AQ6UVW9 174 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 SPNS3Q6ZMD2 512 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 SAXO1Q8IYX7 474 aa6.87□□□□□ -1.31
HDAC6-216ENST00000468949 ZSCAN4Q8NAM6 433 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-216ENST00000468949 AQP3Q92482 292 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms