RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 CLRN1P58418 232 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 GABREP78334 506 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 COL13A1Q5TAT6 717 aaPredicted RBP11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 FAM89BQ8N5H3 189 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 OR1N1Q8NGS0 311 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 OR1J1Q8NGS3 322 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 SLAMF9Q96A28 289 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 LYZL4Q96KX0 146 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 TCEAL7Q9BRU2 100 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 SLC35B3Q9H1N7 401 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 TUBD1Q9UJT1 453 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 NXT1Q9UKK6 140 aaKnown RBP11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 CDRT15L2A8MXV6 281 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 F5H5K5 113 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 SLC33A1O00400 549 aaPredicted RBP11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 IFNA21P01568 189 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 TMEM225BP0DP42 221 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 FCGR2AP12318 317 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 APOBEC1P41238 236 aaKnown RBP11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 ZP4Q12836 540 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 HMGN3Q15651 99 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 GFI1BQ5VTD9 330 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 OGFOD3Q6PK18 319 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 MFSD8Q8NHS3 518 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 FAAP24Q9BTP7 215 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 MRPL13Q9BYD1 178 aaKnown RBP11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 VN1R1Q9GZP7 353 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 LUZP4Q9P127 313 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 PADI1Q9ULC6 663 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 B3GALT1Q9Y5Z6 326 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 VPS13AQ96RL7 3174 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 CABIN1Q9Y6J0 2220 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 FREM2Q5SZK8 3169 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 LIPT2A6NK58 231 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 ANGPTL7O43827 346 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 RAB2AP61019 212 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 SLC35A1P78382 337 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 MYBPHQ13203 477 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 HAGHQ16775 308 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 ZNF383Q8NA42 475 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 MARS2Q96GW9 593 aaKnown RBP11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 PLEKHJ1Q9NW61 149 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 HDGFL3Q9Y3E1 203 aa11.03□□□□□ -0.64
CLCNKA-204ENST00000464764 LRP4O75096 1905 aa11.02□□□□□ -0.64
CLCNKA-204ENST00000464764 FOXI3A8MTJ6 420 aaPredicted RBP11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 DCAF7P61962 342 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 CHAF1BQ13112 559 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 PDCD1Q15116 288 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 OR14K1Q8NGZ2 314 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 LMX1AQ8TE12 382 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 HPSE2Q8WWQ2 592 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 PNRC2Q9NPJ4 139 aaKnown RBP11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 MMACHCQ9Y4U1 282 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 CRYM-AS1A6NIL9 109 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 RNF224P0DH78 156 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 MYF5P13349 255 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 GPX4P36969 197 aaPredicted RBP11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 DEFB133Q30KQ1 61 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 C14orf28Q4W4Y0 310 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 SOHLH1Q5JUK2 328 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 NSUN5P2Q63ZY6 315 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 HEPN1Q6WQI6 88 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 SPNS3Q6ZMD2 512 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 ZNF574Q6ZN55 896 aaPredicted RBP11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 OR5L1Q8NGL2 311 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 OR11L1Q8NGX0 322 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 SSC4DQ8WTU2 575 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 OIT3Q8WWZ8 545 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 TMEM234Q8WY98 164 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 LMAN1LQ9HAT1 526 aa11.02□□□□□ -0.65
CLCNKA-204ENST00000464764 CXCL1P09341 107 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 OR5H8P0DN80 308 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 OMGP23515 440 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 PMELP40967 661 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 UCP2P55851 309 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 TAF9Q16594 264 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 CPEB2Q7Z5Q1 589 aaKnown RBP11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 OR1L3Q8NH93 324 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 ARV1Q9H2C2 271 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 FAM86C1Q9NVL1 165 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 DOK5Q9P104 306 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 CCDC163A0A0D9SF12 145 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 H0YL77 283 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 IFNA17P01571 189 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 QDPRP09417 244 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 SEC11BP0C7V7 166 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 SMAD4Q13485 552 aaKnown RBP11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 ZNF441Q8N8Z8 693 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 ZFP62Q8NB50 900 aaPredicted RBP11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 PIAS3Q9Y6X2 628 aa11.01□□□□□ -0.65
CLCNKA-204ENST00000464764 TNFSF12-TNFSF13A0A0A6YY99 330 aa11□□□□□ -0.65
CLCNKA-204ENST00000464764 ZNF850A8MQ14 1090 aa11□□□□□ -0.65
CLCNKA-204ENST00000464764 E5RGE8 158 aa11□□□□□ -0.65
CLCNKA-204ENST00000464764 YKT6O15498 198 aa11□□□□□ -0.65
CLCNKA-204ENST00000464764 DBHP09172 617 aa11□□□□□ -0.65
CLCNKA-204ENST00000464764 PGA4P0DJD7 388 aa11□□□□□ -0.65
CLCNKA-204ENST00000464764 PGA3P0DJD8 388 aa11□□□□□ -0.65
CLCNKA-204ENST00000464764 HOXA5P20719 270 aa11□□□□□ -0.65
CLCNKA-204ENST00000464764 SFTPDP35247 375 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms