RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 PXT1Q8NFP0 134 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 OR6M1Q8NGM8 313 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 OR51F2Q8NH61 342 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 NPRL2Q8WTW4 380 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 TNFAIP8L1Q8WVP5 186 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 HPSE2Q8WWQ2 592 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 TMIGD2Q96BF3 282 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 YIPF6Q96EC8 236 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 MRPS24Q96EL2 167 aaKnown RBP9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 POM121Q96HA1 1249 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 FUNDC2Q9BWH2 189 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 CST11Q9H112 138 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 METTL9Q9H1A3 318 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 LIME1Q9H400 295 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 ELL3Q9HB65 397 aaPredicted RBP9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 SMURF1Q9HCE7 757 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 UFSP2Q9NUQ7 469 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 DNAJB11Q9UBS4 358 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 PPIAL4AQ9Y536 164 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 V9GY05 133 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 IGKV1-9A0A0C4DH69 117 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 LOC100289279A0A1B0GTE1 492 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 CCDC160A6NGH7 325 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 TMEM178BH3BS89 294 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 PPIHO43447 177 aaKnown RBP9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 LMX1BO60663 402 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 NCR1O76036 304 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 IL1AP01583 271 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 IGHV4-39P01824 125 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 HPXP02790 462 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 ANOS1P23352 680 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 GLRA1P23415 457 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 MPZP25189 248 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 GIFP27352 417 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 SOX6P35712 828 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 MDH2P40926 338 aaKnown RBP9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 PTGFRP43088 359 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 POU3F4P49335 361 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 SCAND1P57086 179 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 CLEC12BQ2HXU8 276 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 TMEM255AQ5JRV8 349 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 GPR107Q5VW38 600 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 AWAT2Q6E213 333 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 USP43Q70EL4 1123 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 SLC25A26Q70HW3 274 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 NLRC3Q7RTR2 1065 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 OR52N4Q8NGI2 321 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 OR51A2Q8NGJ7 313 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 LRRC29Q8WV35 223 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 AQP3Q92482 292 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 AP3S1Q92572 193 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 CEP19Q96LK0 163 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 OR51E2Q9H255 320 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 PGPEP1Q9NXJ5 209 aa9.31□□□□□ -0.92
SMNDC1-203ENST00000460483 NOTOA8MTQ0 251 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 ZNF701M0R085 212 aaPredicted RBP9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 PIN1P1O15428 100 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 NXPH2O95156 264 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 GABARAPO95166 117 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 GTF2F2P13984 249 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 HTR2CP28335 458 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 BTG1P62324 171 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 SPIN3Q5JUX0 258 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 PRAMEF6Q5VXH4 476 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 WDR82Q6UXN9 313 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 SLC36A1Q7Z2H8 476 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 ANGPTL5Q86XS5 388 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 CLVS1Q8IUQ0 354 aaPredicted RBP9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 POC1AQ8NBT0 407 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 PPP1R35Q8TAP8 253 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 TBC1D15Q8TC07 691 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 GTF3AQ92664 365 aaKnown RBP9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 NRGNQ92686 78 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 RPL3LQ92901 407 aaKnown RBP9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 DVL3Q92997 716 aaPredicted RBP9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 RAB39BQ96DA2 213 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 DNTTIP1Q9H147 329 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 BATF3Q9NR55 127 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 PCDHB10Q9UN67 800 aa9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 MRPS28Q9Y2Q9 187 aaKnown RBP9.3□□□□□ -0.92
SMNDC1-203ENST00000460483 ICE1Q9Y2F5 2266 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 TRAV8-7A0A075B6U6 113 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 ISPDA4D126 451 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 OOEPA6NGQ2 149 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 NKX6-3A6NJ46 265 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 SRRM5B3KS81 715 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 LGALS8O00214 317 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 SLC17A2O00624 439 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 SCGNO76038 276 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 PGA5P0DJD9 388 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 ARSBP15848 533 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 ART1P52961 327 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 BLMHQ13867 455 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 MPPED2Q15777 294 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 RAB11BQ15907 218 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 C11orf91Q3C1V1 193 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 TMEM155Q4W5P6 130 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 Q5PR19 223 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 LINC00596Q86U02 117 aa9.29□□□□□ -0.92
SMNDC1-203ENST00000460483 KCNG3Q8TAE7 436 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms