RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 MSI2Q96DH6 328 aaKnown RBP10.73□□□□□ -0.69
COL18A1-206ENST00000459895 DERL3Q96Q80 235 aa10.73□□□□□ -0.69
COL18A1-206ENST00000459895 TMED9Q9BVK6 235 aa10.73□□□□□ -0.69
COL18A1-206ENST00000459895 LPAR2Q9HBW0 351 aa10.73□□□□□ -0.69
COL18A1-206ENST00000459895 CTSZQ9UBR2 303 aa10.73□□□□□ -0.69
COL18A1-206ENST00000459895 DUX4Q9UBX2 424 aa10.73□□□□□ -0.69
COL18A1-206ENST00000459895 LRCH1Q9Y2L9 728 aa10.73□□□□□ -0.69
COL18A1-206ENST00000459895 NSD1Q96L73 2696 aaPredicted RBP10.73□□□□□ -0.69
COL18A1-206ENST00000459895 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.72□□□□□ -0.697e-8■■■■□ 19.3
COL18A1-206ENST00000459895 TRAV8-7A0A075B6U6 113 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 TRBV5-7A0A0A0MS05 114 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 CD5LO43866 347 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 FSTL3O95633 263 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 SERPINA3P01011 423 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 CD1AP06126 327 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 CD2P06729 351 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 HCKP08631 526 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 PGA5P0DJD9 388 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 PCMT1P22061 227 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 CFHR2P36980 270 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 POU3F4P49335 361 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 GZMKP49863 264 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 FUT6P51993 359 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 EMX1Q04741 257 aaPredicted RBP10.72□□□□□ -0.69
COL18A1-206ENST00000459895 FAM27D1Q5T7N8 215 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 STUMQ69YW2 141 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 LYPD2Q6UXB3 125 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 DCDC5Q6ZRR9 648 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 LHFPL2Q6ZUX7 228 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 SPARTQ8N0X7 666 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 SVOPQ8N4V2 548 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 DNAAF1Q8NEP3 725 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 OR5D18Q8NGL1 313 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 SLAMF9Q96A28 289 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 C1orf159Q96HA4 380 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 PKIBQ9C010 78 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 TMEM165Q9HC07 324 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 POLDIP2Q9Y2S7 368 aa10.72□□□□□ -0.69
COL18A1-206ENST00000459895 TEP1Q99973 2627 aaKnown RBP10.72□□□□□ -0.69
COL18A1-206ENST00000459895 KIAA1324LA8MWY0 1029 aaPredicted RBP10.71□□□□□ -0.69
COL18A1-206ENST00000459895 ZNF879B4DU55 563 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 SPRY1O43609 319 aaPredicted RBP10.71□□□□□ -0.69
COL18A1-206ENST00000459895 MRPS14O60783 128 aaKnown RBP10.71□□□□□ -0.69
COL18A1-206ENST00000459895 FCN3O75636 299 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 GYPAP02724 150 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 OCMP0CE72 109 aaPredicted RBP10.71□□□□□ -0.69
COL18A1-206ENST00000459895 CPEP16870 476 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 RAB3AP20336 220 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 PRKACBP22694 351 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 RBP2P50120 134 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 IL24Q13007 206 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 SSX1Q16384 188 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 UBE2UQ5VVX9 321 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 SLC25A26Q70HW3 274 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 SERPINA12Q8IW75 414 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 FAM216BQ8N7L0 139 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 MGLLQ99685 303 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 NRIP2Q9BQI9 281 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 YTHDF1Q9BYJ9 559 aaKnown RBP10.71□□□□□ -0.69
COL18A1-206ENST00000459895 PATZ1Q9HBE1 687 aaKnown RBP10.71□□□□□ -0.69
COL18A1-206ENST00000459895 SMURF1Q9HCE7 757 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 ISYNA1Q9NPH2 558 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 SNTG1Q9NSN8 517 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 DNAJB11Q9UBS4 358 aa10.71□□□□□ -0.69
COL18A1-206ENST00000459895 TRAV38-1A0A0B4J264 116 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 A0A1W2PPK0 400 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 A8MXK9 166 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 F8VVB4 439 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 F8VWA3 439 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 GABRPO00591 440 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 PIN1P1O15428 100 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 SC5DO75845 299 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 INMTO95050 263 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 TNFAIP8O95379 198 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 MSMBP08118 114 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 SELLP14151 372 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 IGFBP3P17936 291 aaPredicted RBP10.7□□□□□ -0.7
COL18A1-206ENST00000459895 GLRA1P23415 457 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 PSMB9P28065 219 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 CEBPDP49716 269 aaPredicted RBP10.7□□□□□ -0.7
COL18A1-206ENST00000459895 ATP1B3P54709 279 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 MTCP1P56278 107 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 ZP1P60852 638 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 PPP3R1P63098 170 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 TPBGQ13641 420 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 SMIM21Q3B7S5 101 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 DDI2Q5TDH0 399 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 PHC2Q8IXK0 858 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 FGFRL1Q8N441 504 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 LINC01356Q8N9X3 169 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 OR52N4Q8NGI2 321 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 OR5D14Q8NGL3 314 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 TMEM203Q969S6 136 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 HES4Q9HCC6 221 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 NOX4Q9NPH5 578 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 NDUFB11Q9NX14 153 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 NLKQ9UBE8 527 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 IL36RNQ9UBH0 155 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 ZNF222Q9UK12 451 aa10.7□□□□□ -0.7
COL18A1-206ENST00000459895 PCDHB10Q9UN67 800 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms