RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 BORCS8Q96FH0 119 aa19.24■□□□□ 0.67
CBX3-204ENST00000456948 PKIBQ9C010 78 aa19.24■□□□□ 0.67
CBX3-204ENST00000456948 COMMD4Q9H0A8 199 aa19.24■□□□□ 0.67
CBX3-204ENST00000456948 ZNF879B4DU55 563 aa19.23■□□□□ 0.67
CBX3-204ENST00000456948 FSHBP01225 129 aa19.23■□□□□ 0.67
CBX3-204ENST00000456948 MYL12AP19105 171 aa19.23■□□□□ 0.67
CBX3-204ENST00000456948 TGM4P49221 684 aa19.23■□□□□ 0.67
CBX3-204ENST00000456948 SRSF2Q01130 221 aaKnown RBP19.23■□□□□ 0.67
CBX3-204ENST00000456948 IKZF1Q13422 519 aa19.23■□□□□ 0.67
CBX3-204ENST00000456948 CMTM4Q8IZR5 234 aa19.23■□□□□ 0.67
CBX3-204ENST00000456948 RDH10Q8IZV5 341 aa19.23■□□□□ 0.67
CBX3-204ENST00000456948 POC1AQ8NBT0 407 aa19.23■□□□□ 0.67
CBX3-204ENST00000456948 ANGPTL6Q8NI99 470 aa19.23■□□□□ 0.67
CBX3-204ENST00000456948 ZFAND2BQ8WV99 257 aa19.23■□□□□ 0.67
CBX3-204ENST00000456948 APH1BQ8WW43 257 aa19.23■□□□□ 0.67
CBX3-204ENST00000456948 DACT3Q96B18 629 aaPredicted RBP19.23■□□□□ 0.67
CBX3-204ENST00000456948 CNTD2Q9H8S5 307 aa19.23■□□□□ 0.67
CBX3-204ENST00000456948 SMURF1Q9HCE7 757 aa19.23■□□□□ 0.67
CBX3-204ENST00000456948 FGF20Q9NP95 211 aaPredicted RBP19.23■□□□□ 0.67
CBX3-204ENST00000456948 TMEM212A6NML5 194 aa19.22■□□□□ 0.67
CBX3-204ENST00000456948 C22orf46C9J442 243 aa19.22■□□□□ 0.67
CBX3-204ENST00000456948 NOS1APO75052 506 aaPredicted RBP19.22■□□□□ 0.67
CBX3-204ENST00000456948 WBP4O75554 376 aaKnown RBP19.22■□□□□ 0.67
CBX3-204ENST00000456948 NXPH2O95156 264 aa19.22■□□□□ 0.67
CBX3-204ENST00000456948 CYB5AP00167 134 aa19.22■□□□□ 0.67
CBX3-204ENST00000456948 ACAA1P09110 424 aaPredicted RBP19.22■□□□□ 0.67
CBX3-204ENST00000456948 PRKACBP22694 351 aa19.22■□□□□ 0.67
CBX3-204ENST00000456948 CAPGP40121 348 aa19.22■□□□□ 0.67
CBX3-204ENST00000456948 FGF12P61328 243 aa19.22■□□□□ 0.67
CBX3-204ENST00000456948 GPR157Q5UAW9 335 aa19.22■□□□□ 0.67
CBX3-204ENST00000456948 ZNF788Q6ZQV5 615 aa19.22■□□□□ 0.67
CBX3-204ENST00000456948 C8orf59Q8N0T1 100 aaPredicted RBP19.22■□□□□ 0.67
CBX3-204ENST00000456948 OR13C3Q8NGS6 347 aa19.22■□□□□ 0.67
CBX3-204ENST00000456948 TRMT10AQ8TBZ6 339 aaKnown RBP19.22■□□□□ 0.67
CBX3-204ENST00000456948 SEH1LQ96EE3 360 aa19.22■□□□□ 0.67
CBX3-204ENST00000456948 JAM3Q9BX67 310 aa19.22■□□□□ 0.67
CBX3-204ENST00000456948 TRIM77I1YAP6 450 aa19.21■□□□□ 0.67
CBX3-204ENST00000456948 TOX4O94842 621 aa19.21■□□□□ 0.67
CBX3-204ENST00000456948 PGA5P0DJD9 388 aa19.21■□□□□ 0.67
CBX3-204ENST00000456948 RBP2P50120 134 aa19.21■□□□□ 0.67
CBX3-204ENST00000456948 ATP1B3P54709 279 aa19.21■□□□□ 0.67
CBX3-204ENST00000456948 HILS1P60008 231 aa19.21■□□□□ 0.67
CBX3-204ENST00000456948 NANOS3P60323 173 aaKnown RBP19.21■□□□□ 0.67
CBX3-204ENST00000456948 ADARB1P78563 741 aaKnown RBP19.21■□□□□ 0.67
CBX3-204ENST00000456948 IL24Q13007 206 aa19.21■□□□□ 0.67
CBX3-204ENST00000456948 UTS2BQ765I0 119 aa19.21■□□□□ 0.67
CBX3-204ENST00000456948 FAM216BQ8N7L0 139 aa19.21■□□□□ 0.67
CBX3-204ENST00000456948 DNAAF1Q8NEP3 725 aa19.21■□□□□ 0.67
CBX3-204ENST00000456948 FGGYQ96C11 551 aa19.21■□□□□ 0.67
CBX3-204ENST00000456948 SLC6A7Q99884 636 aa19.21■□□□□ 0.67
CBX3-204ENST00000456948 SLC25A10Q9UBX3 287 aaPredicted RBP19.21■□□□□ 0.67
CBX3-204ENST00000456948 RPUSD1Q9UJJ7 312 aaKnown RBP19.21■□□□□ 0.67
CBX3-204ENST00000456948 OR4C45A6NMZ5 311 aa19.2■□□□□ 0.66
CBX3-204ENST00000456948 SLC1A7O00341 560 aa19.2■□□□□ 0.66
CBX3-204ENST00000456948 SIGLEC5O15389 551 aa19.2■□□□□ 0.66
CBX3-204ENST00000456948 CLIC3O95833 236 aa19.2■□□□□ 0.66
CBX3-204ENST00000456948 PSG2P11465 335 aa19.2■□□□□ 0.66
CBX3-204ENST00000456948 MPZP25189 248 aa19.2■□□□□ 0.66
CBX3-204ENST00000456948 ELF3P78545 371 aaPredicted RBP19.2■□□□□ 0.66
CBX3-204ENST00000456948 SLC34A1Q06495 639 aa19.2■□□□□ 0.66
CBX3-204ENST00000456948 PDCD1Q15116 288 aa19.2■□□□□ 0.66
CBX3-204ENST00000456948 UBE2V2Q15819 145 aa19.2■□□□□ 0.66
CBX3-204ENST00000456948 SMN1Q16637 294 aaKnown RBP19.2■□□□□ 0.66
CBX3-204ENST00000456948 ACP7Q6ZNF0 438 aa19.2■□□□□ 0.66
CBX3-204ENST00000456948 OR5AK2Q8NH90 309 aa19.2■□□□□ 0.66
CBX3-204ENST00000456948 CNIH3Q8TBE1 160 aa19.2■□□□□ 0.66
CBX3-204ENST00000456948 NPRL2Q8WTW4 380 aa19.2■□□□□ 0.66
CBX3-204ENST00000456948 H1FXQ92522 213 aaKnown RBP19.2■□□□□ 0.66
CBX3-204ENST00000456948 SPSB1Q96BD6 273 aa19.2■□□□□ 0.66
CBX3-204ENST00000456948 WDFY2Q96P53 400 aa19.2■□□□□ 0.66
CBX3-204ENST00000456948 PCGF1Q9BSM1 259 aa19.2■□□□□ 0.66
CBX3-204ENST00000456948 ISG20L2Q9H9L3 353 aaKnown RBP19.2■□□□□ 0.66
CBX3-204ENST00000456948 CAB39Q9Y376 341 aaPredicted RBP19.2■□□□□ 0.66
CBX3-204ENST00000456948 EXOSC1Q9Y3B2 195 aaKnown RBP19.2■□□□□ 0.66
CBX3-204ENST00000456948 TRBV2A0A0J9YWF9 115 aa19.19■□□□□ 0.66
CBX3-204ENST00000456948 SYNGR1O43759 233 aa19.19■□□□□ 0.66
CBX3-204ENST00000456948 NDUFB7P17568 137 aa19.19■□□□□ 0.66
CBX3-204ENST00000456948 CAPZA1P52907 286 aa19.19■□□□□ 0.66
CBX3-204ENST00000456948 CAV3P56539 151 aa19.19■□□□□ 0.66
CBX3-204ENST00000456948 KRTAP24-1Q3LI83 254 aa19.19■□□□□ 0.66
CBX3-204ENST00000456948 CCDC58Q4VC31 144 aa19.19■□□□□ 0.66
CBX3-204ENST00000456948 FIP1L1Q6UN15 594 aaKnown RBP19.19■□□□□ 0.66
CBX3-204ENST00000456948 ANGPTL5Q86XS5 388 aa19.19■□□□□ 0.66
CBX3-204ENST00000456948 MKXQ8IYA7 352 aa19.19■□□□□ 0.66
CBX3-204ENST00000456948 C22orf15Q8WYQ4 148 aa19.19■□□□□ 0.66
CBX3-204ENST00000456948 RNF166Q96A37 237 aaPredicted RBP19.19■□□□□ 0.66
CBX3-204ENST00000456948 TMEM80Q96HE8 168 aa19.19■□□□□ 0.66
CBX3-204ENST00000456948 C19orf24Q9BVV8 132 aa19.19■□□□□ 0.66
CBX3-204ENST00000456948 KPTNQ9Y664 436 aa19.19■□□□□ 0.66
CBX3-204ENST00000456948 TRAV40A0A0B4J280 105 aa19.18■□□□□ 0.66
CBX3-204ENST00000456948 RGS9O75916 674 aaPredicted RBP19.18■□□□□ 0.66
CBX3-204ENST00000456948 ATF1P18846 271 aa19.18■□□□□ 0.66
CBX3-204ENST00000456948 MTCP1P56278 107 aa19.18■□□□□ 0.66
CBX3-204ENST00000456948 ARF6P62330 175 aa19.18■□□□□ 0.66
CBX3-204ENST00000456948 BLMHQ13867 455 aa19.18■□□□□ 0.66
CBX3-204ENST00000456948 KLF17Q5JT82 389 aaPredicted RBP19.18■□□□□ 0.66
CBX3-204ENST00000456948 LHFPL2Q6ZUX7 228 aa19.18■□□□□ 0.66
CBX3-204ENST00000456948 Q8IYB0 196 aa19.18■□□□□ 0.66
CBX3-204ENST00000456948 ZNF561Q8N587 486 aa19.18■□□□□ 0.66
CBX3-204ENST00000456948 OR5D14Q8NGL3 314 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms