RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 APOA1P02647 267 aa8.34□□□□□ -1.08
SMPD4-203ENST00000412570 ZNF14P17017 642 aaPredicted RBP8.34□□□□□ -1.08
SMPD4-203ENST00000412570 GDNFP39905 211 aa8.34□□□□□ -1.08
SMPD4-203ENST00000412570 IKZF1Q13422 519 aa8.34□□□□□ -1.08
SMPD4-203ENST00000412570 WBP1Q96G27 269 aa8.34□□□□□ -1.08
SMPD4-203ENST00000412570 DMRTB1Q96MA1 342 aa8.34□□□□□ -1.08
SMPD4-203ENST00000412570 OR10A4Q9H209 315 aa8.34□□□□□ -1.08
SMPD4-203ENST00000412570 A3GALT2U3KPV4 340 aa8.34□□□□□ -1.08
SMPD4-203ENST00000412570 IGKV1-12A0A0C4DH73 117 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 ZNF816-ZNF321PA0A0X1KG74 233 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 PLSCR5A0PG75 271 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 IGKV1D-12P01611 117 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 COL8A1P27658 744 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 DDOSTP39656 456 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 EIF2B2P49770 351 aaKnown RBP8.33□□□□□ -1.08
SMPD4-203ENST00000412570 NAAAQ02083 359 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 ZNF45Q02386 682 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 UBE2NLQ5JXB2 153 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 GDPD3Q7L5L3 318 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 ZDHHC23Q8IYP9 409 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 OR6M1Q8NGM8 313 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 AKAP1Q92667 903 aaKnown RBP eCLIP8.33□□□□□ -1.082e-7■■■■□ 20
SMPD4-203ENST00000412570 GPHA2Q96T91 129 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 GLRX2Q9NS18 164 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 PLEKHJ1Q9NW61 149 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 ST3GAL6Q9Y274 331 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 MEMO1Q9Y316 297 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 NAV2Q8IVL1 2488 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 ISPDA4D126 451 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 FAM172BPA6NC97 362 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 PMP2P02689 132 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 BAMBIQ13145 260 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 CLVS2Q5SYC1 327 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 ITPKCQ96DU7 683 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 FGF23Q9GZV9 251 aaPredicted RBP8.33□□□□□ -1.08
SMPD4-203ENST00000412570 PRORYQ9H606 182 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 FOXJ3Q9UPW0 622 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 CACNG2Q9Y698 323 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 RAF1P04049 648 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 GABRA2P47869 451 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 DEFA1P59665 94 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 DEFA3P59666 94 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 EDDM3AQ14507 147 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 ZNF181Q2M3W8 571 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 RGS7BPQ6MZT1 257 aaPredicted RBP8.33□□□□□ -1.08
SMPD4-203ENST00000412570 CHST5Q9GZS9 411 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 TBC1D24Q9ULP9 559 aa8.33□□□□□ -1.08
SMPD4-203ENST00000412570 TUBAL3A6NHL2 446 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 ISG15P05161 165 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 THBS4P35443 961 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 GNG2P59768 71 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 MRPL28Q13084 256 aaKnown RBP8.32□□□□□ -1.08
SMPD4-203ENST00000412570 FDX2Q6P4F2 183 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 TRAPPC6BQ86SZ2 158 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 ASCC1Q8N9N2 400 aaKnown RBP8.32□□□□□ -1.08
SMPD4-203ENST00000412570 HPSE2Q8WWQ2 592 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 IL1F10Q8WWZ1 152 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 SLC6A7Q99884 636 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 MOB1AQ9H8S9 216 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 CYSLTR2Q9NS75 346 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 NUDT15Q9NV35 164 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 TAAR3PQ9P1P4 343 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 ARHGAP32A7KAX9 2087 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 ABCA1O95477 2261 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 DOPEY1Q5JWR5 2465 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 RPL36A-HNRNPH2H7BZ11 118 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 XRCC2O43543 280 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 ORC5O43913 435 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 HLA-DQB1P01920 261 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 CD3DP04234 171 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 OTX1P32242 354 aaPredicted RBP8.32□□□□□ -1.08
SMPD4-203ENST00000412570 ATP1B3P54709 279 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 HIST1H3AP68431 136 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 SF3B4Q15427 424 aaKnown RBP eCLIP8.32□□□□□ -1.081e-6■■■■■ 54.2
SMPD4-203ENST00000412570 HIST2H3PS2Q5TEC6 136 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 FOXL2NBQ6ZUU3 175 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 HIST2H3AQ71DI3 136 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 OR4K15Q8NH41 348 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 FCAMRQ8WWV6 532 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 RAB3CQ96E17 227 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 SFXN3Q9BWM7 321 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 IFT46Q9NQC8 304 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 PRR13Q9NZ81 148 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 ABRACLQ9P1F3 81 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 SLC25A15Q9Y619 301 aa8.32□□□□□ -1.08
SMPD4-203ENST00000412570 SONP18583 2426 aaKnown RBP8.32□□□□□ -1.08
SMPD4-203ENST00000412570 A0A0A6YYD4 124 aa8.31□□□□□ -1.08
SMPD4-203ENST00000412570 METTL21EPA6NDL7 271 aa8.31□□□□□ -1.08
SMPD4-203ENST00000412570 DPRXA6NFQ7 191 aa8.31□□□□□ -1.08
SMPD4-203ENST00000412570 MSTNO14793 375 aa8.31□□□□□ -1.08
SMPD4-203ENST00000412570 ATP6V1G1O75348 118 aa8.31□□□□□ -1.08
SMPD4-203ENST00000412570 PRSS3P35030 304 aa8.31□□□□□ -1.08
SMPD4-203ENST00000412570 TIMP3P35625 211 aa8.31□□□□□ -1.08
SMPD4-203ENST00000412570 PTH2RP49190 550 aa8.31□□□□□ -1.08
SMPD4-203ENST00000412570 NKX2-5P52952 324 aaPredicted RBP8.31□□□□□ -1.08
SMPD4-203ENST00000412570 MRPS15P82914 257 aaKnown RBP8.31□□□□□ -1.08
SMPD4-203ENST00000412570 ADORA2A-AS1P86434 159 aa8.31□□□□□ -1.08
SMPD4-203ENST00000412570 ATXN7L3Q14CW9 347 aaPredicted RBP8.31□□□□□ -1.08
SMPD4-203ENST00000412570 P2RY6Q15077 328 aa8.31□□□□□ -1.08
SMPD4-203ENST00000412570 RPUSD3Q6P087 351 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms