RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 C12orf4Q9NQ89 552 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 RYDENQ9NUL5 291 aaKnown RBP12.3□□□□□ -0.44
SCAF4-202ENST00000399804 GNG12Q9UBI6 72 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 ISG15P05161 165 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 SELEP16581 610 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 SUCLG1P53597 346 aaKnown RBP12.3□□□□□ -0.44
SCAF4-202ENST00000399804 PLA1AQ53H76 456 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 SLC25A53Q5H9E4 307 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 AADACL3Q5VUY0 350 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 LPCAT3Q6P1A2 487 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 DPPA2Q7Z7J5 298 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 HAS2Q92819 552 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 TECTBQ96PL2 329 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 PIGBOS1A0A0B4J2F0 54 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 A0A1W2PP11 408 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 CD300LBA8K4G0 201 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 TGM6O95932 706 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 IFNA2P01563 188 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 HPXP02790 462 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 BMP5P22003 454 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 SERPINF1P36955 418 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 FBXW9Q5XUX1 488 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 GFRALQ6UXV0 394 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 NLRC3Q7RTR2 1065 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 PHF3Q92576 2039 aaKnown RBP12.3□□□□□ -0.44
SCAF4-202ENST00000399804 KIRREL1Q96J84 757 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 HINT2Q9BX68 163 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 CHST5Q9GZS9 411 aa12.3□□□□□ -0.44
SCAF4-202ENST00000399804 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.3□□□□□ -0.44
SCAF4-202ENST00000399804 ARPC4-TTLL3A0A0A6YYG9 625 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 A0A0D9SG52 128 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 A0A0G2JK05 382 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 OR5H14A6NHG9 310 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 FSTP19883 344 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 ZNF616Q08AN1 781 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 MUC20Q8N307 709 aaPredicted RBP12.29□□□□□ -0.44
SCAF4-202ENST00000399804 ST8SIA4Q92187 359 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 EXTL1Q92935 676 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 OPA3Q9H6K4 179 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 TP53BP1Q12888 1972 aaPredicted RBP12.29□□□□□ -0.44
SCAF4-202ENST00000399804 PPP3CBP16298 524 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 ECI1P42126 302 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 EDDM3BP56851 147 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 CXorf67Q86X51 503 aaPredicted RBP12.29□□□□□ -0.44
SCAF4-202ENST00000399804 OR6K3Q8NGY3 331 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 SGK3Q96BR1 496 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 A0A1B0GV50 99 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 LYG2Q86SG7 212 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 WFDC8Q8IUA0 241 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 TMEM104Q8NE00 496 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 SCGB1C1Q8TD33 95 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 EDARQ9UNE0 448 aa12.29□□□□□ -0.44
SCAF4-202ENST00000399804 RANBP2P49792 3224 aaKnown RBP12.28□□□□□ -0.44
SCAF4-202ENST00000399804 IGLV3-32A0A0A0MS00 114 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 A0A0B4J2A0 478 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 CXCL3P19876 107 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 RSPO4Q2I0M5 234 aaPredicted RBP12.28□□□□□ -0.44
SCAF4-202ENST00000399804 FAM76BQ5HYJ3 339 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 TMEM100Q9NV29 134 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 SHPKQ9UHJ6 478 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 FZR1Q9UM11 496 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 PTPRSQ13332 1948 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 K7EPK0 472 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 GLRA1P23415 457 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 ZNF83P51522 516 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 DHRS2Q13268 280 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 RIPPLY2Q5TAB7 128 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 FAM71E2Q8N5Q1 922 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 DEFB108BQ8NET1 73 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 FDCSPQ8NFU4 85 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 OR51H1Q8NH63 302 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 OR10J5Q8NHC4 309 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 GPX8Q8TED1 209 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 B3GNT2Q9NY97 397 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 TRGV8A0A0C4DH27 118 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 A0A0U1RQV5 110 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 HSD17B6O14756 317 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 IFNA5P01569 189 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 APOC3P02656 99 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 OR8U9P0C7N5 309 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 TPT1P13693 172 aaKnown RBP12.28□□□□□ -0.44
SCAF4-202ENST00000399804 HLXQ14774 488 aaPredicted RBP12.28□□□□□ -0.44
SCAF4-202ENST00000399804 LGI3Q8N145 548 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 SUMF1Q8NBK3 374 aa12.28□□□□□ -0.44
SCAF4-202ENST00000399804 WDR89Q96FK6 387 aaPredicted RBP12.28□□□□□ -0.44
SCAF4-202ENST00000399804 SH2D1BO14796 132 aa12.27□□□□□ -0.44
SCAF4-202ENST00000399804 FBXO24O75426 580 aa12.27□□□□□ -0.44
SCAF4-202ENST00000399804 TSPAN9O75954 239 aa12.27□□□□□ -0.44
SCAF4-202ENST00000399804 RPA2P15927 270 aa12.27□□□□□ -0.44
SCAF4-202ENST00000399804 SLC38A6Q8IZM9 456 aa12.27□□□□□ -0.44
SCAF4-202ENST00000399804 FGF11Q92914 225 aa12.27□□□□□ -0.44
SCAF4-202ENST00000399804 ZNF837Q96EG3 531 aaPredicted RBP12.27□□□□□ -0.44
SCAF4-202ENST00000399804 MRPL13Q9BYD1 178 aaKnown RBP12.27□□□□□ -0.44
SCAF4-202ENST00000399804 DEPPQ9NTK1 212 aa12.27□□□□□ -0.44
SCAF4-202ENST00000399804 SLC23A1Q9UHI7 598 aa12.27□□□□□ -0.44
SCAF4-202ENST00000399804 A0A0B4J293 547 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 ALKBH6Q3KRA9 238 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 TMEM128Q5BJH2 165 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 SIGIRRQ6IA17 410 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 C10orf35Q96D05 121 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms