RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 MSX1P28360 303 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 POLR2GP62487 172 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 HTD2P86397 168 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 ZNF260Q3ZCT1 412 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 OXGR1Q96P68 337 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 PLEKHF2Q9H8W4 249 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 PARP11Q9NR21 331 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 RCC2Q9P258 522 aaKnown RBP11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 EIF1BO60739 113 aaKnown RBP11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 TCN2P20062 427 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 DCDP81605 110 aaKnown RBP11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 DRAM2Q6UX65 266 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 PPP1R3BQ86XI6 285 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 OR2C3Q8N628 320 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 TMEM37Q8WXS4 190 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 FAM210BQ96KR6 192 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 REG4Q9BYZ8 158 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 ZNF816-ZNF321PA0A0X1KG74 233 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 BGLAPP02818 100 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 MCHR2Q969V1 340 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 ELSPBP1Q96BH3 223 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 OR10C1Q96KK4 312 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 CDCA3Q99618 268 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 OPA3Q9H6K4 179 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 SERTAD4Q9NUC0 356 aa11.65□□□□□ -0.54
TRAPPC9-201ENST00000389328 PSME4Q14997 1843 aa11.65□□□□□ -0.55
TRAPPC9-201ENST00000389328 APC2O95996 2303 aa11.65□□□□□ -0.55
TRAPPC9-201ENST00000389328 IGHV3-64DA0A0J9YX35 117 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 RBFOX3A6NFN3 312 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 HMGB3O15347 200 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 WDR1O75083 606 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 ABHD16AO95870 558 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 PDGFBP01127 241 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 FUT7Q11130 342 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 FHL5Q5TD97 284 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 SLC25A43Q8WUT9 341 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 TM4SF19Q96DZ7 209 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 LRRC61Q9BV99 259 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 NAA60Q9H7X0 242 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 SPTA1P02549 2419 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 CTSBP07858 339 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 IL2RGP31785 369 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 DHRS11Q6UWP2 260 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 LYZL2Q7Z4W2 148 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 SLC26A10Q8NG04 563 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 OR2I1PQ8NGU4 316 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 PP6455Q8WZ26 134 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 MEGF10Q96KG7 1140 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 SARGQ9BW04 601 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 RSPO3Q9BXY4 272 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 PECRQ9BY49 303 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 PLEKHA3Q9HB20 300 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 UNC13CQ8NB66 2214 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 IGKV1D-42A0A075B6H8 117 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 RNF222A6NCQ9 220 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 BTBD17A6NE02 478 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 MSGN1A6NI15 193 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 MRPL33O75394 65 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 CD8AP01732 235 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 GDF1P27539 372 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 DHODHQ02127 395 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 LTC4SQ16873 150 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 FAM185AQ8N0U4 392 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 OR4F5Q8NH21 305 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 OR4F4Q96R69 305 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 BRWD3Q6RI45 1802 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 C17orf51A8MQB3 221 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 E9PQ18 207 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 DHHO43323 396 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 PDLIM3Q53GG5 364 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 NCR3LG1Q68D85 454 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 OSR2Q8N2R0 312 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 CPT1CQ8TCG5 803 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 GPX7Q96SL4 187 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 GFI1Q99684 422 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 SLC26A1Q9H2B4 701 aa11.64□□□□□ -0.55
TRAPPC9-201ENST00000389328 A0A087X0M5 115 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 A0A1B0GX30 115 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 ANKUB1A6NFN9 424 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 LINC00587B1AMM8 73 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 PRR32B1ATL7 298 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 FTCDNL1E5RQL4 147 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 TTRP02766 147 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 THBS4P35443 961 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 SULT1A2P50226 295 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 MMP16P51512 607 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 MSMO1Q15800 293 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 ZNF66Q6ZN08 573 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 ETV3LQ6ZN32 361 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 MRGPRX4Q96LA9 322 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 HDHD3Q9BSH5 251 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 PPP1R3CQ9UQK1 317 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 CARD18P57730 90 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 MRPL49Q13405 166 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 CEBPEQ15744 281 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 RAB30Q15771 203 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 OR2B11Q5JQS5 317 aa11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 DHRS7BQ6IAN0 325 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC9-201ENST00000389328 BAGE3Q86Y29 109 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms