RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 CHD8Q9HCK8 2581 aa12.88□□□□□ -0.35
UBA1-202ENST00000377269 ALOX5APP20292 161 aa12.88□□□□□ -0.35
UBA1-202ENST00000377269 SNCAP37840 140 aa12.88□□□□□ -0.35
UBA1-202ENST00000377269 RPS4XP62701 263 aaKnown RBP12.88□□□□□ -0.35
UBA1-202ENST00000377269 ODF4Q2M2E3 257 aa12.88□□□□□ -0.35
UBA1-202ENST00000377269 WDR38Q5JTN6 314 aa12.88□□□□□ -0.35
UBA1-202ENST00000377269 ADGRE4PQ86SQ3 457 aa12.88□□□□□ -0.35
UBA1-202ENST00000377269 RNF138Q8WVD3 245 aa12.88□□□□□ -0.35
UBA1-202ENST00000377269 FER1L6-AS2Q96M78 137 aa12.88□□□□□ -0.35
UBA1-202ENST00000377269 TSSK2Q96PF2 358 aa12.88□□□□□ -0.35
UBA1-202ENST00000377269 C20orf24Q9BUV8 137 aa12.88□□□□□ -0.35
UBA1-202ENST00000377269 PLA2G3Q9NZ20 509 aa12.88□□□□□ -0.35
UBA1-202ENST00000377269 LAMP5Q9UJQ1 280 aa12.88□□□□□ -0.35
UBA1-202ENST00000377269 PRRC2CQ9Y520 2896 aaKnown RBP12.88□□□□□ -0.35
UBA1-202ENST00000377269 SEC14L6B5MCN3 397 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 RPL36A-HNRNPH2H7BZ11 118 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 CST4P01036 141 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 GLYATL3Q5SZD4 288 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 ULK3Q6PHR2 472 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 PTX4Q96A99 478 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 NKX3-1Q99801 234 aaPredicted RBP12.87□□□□□ -0.35
UBA1-202ENST00000377269 PROK2Q9HC23 129 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 URB1O60287 2271 aaKnown RBP12.87□□□□□ -0.35
UBA1-202ENST00000377269 A0A087X0M5 115 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 A0A1B0GX30 115 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 BTBD17A6NE02 478 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 GXYLT1Q4G148 440 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 TMEM225Q6GV28 225 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 SPINK14Q6IE38 97 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 POMZP3Q6PJE2 187 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 FJX1Q86VR8 437 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 OR10D4PQ8NGN7 298 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 KCNE4Q8WWG9 221 aa12.87□□□□□ -0.35
UBA1-202ENST00000377269 ANKRD11Q6UB99 2663 aaPredicted RBP12.87□□□□□ -0.35
UBA1-202ENST00000377269 MED12Q93074 2177 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 A0A0G2JMM0 328 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 A0A1W2PPB8 328 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 A0A1W2PRS3 328 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 KIR3DP1A8MWS1 328 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 NDUFA6P56556 154 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 PRPS1P60891 318 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 RPS23P62266 143 aaKnown RBP12.86□□□□□ -0.35
UBA1-202ENST00000377269 IL15RAQ13261 267 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 GAMTQ14353 236 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 GUK1Q16774 197 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 ZNF260Q3ZCT1 412 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 TMEM128Q5BJH2 165 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 UNQ6494/PRO21346Q6UXR6 183 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 UBAC2Q8NBM4 344 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 OIT3Q8WWZ8 545 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 DNAJA3Q96EY1 480 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 WDR76Q9H967 626 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 SH2D2AQ9NP31 389 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 TP53TG5Q9Y2B4 290 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 MSRB2Q9Y3D2 182 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 TP53I11O14683 189 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 TSPAN15O95858 294 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 GAPDHP04406 335 aaKnown RBP12.86□□□□□ -0.35
UBA1-202ENST00000377269 CEACAM6P40199 344 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 LSM6P62312 80 aaKnown RBP12.86□□□□□ -0.35
UBA1-202ENST00000377269 FOXK1P85037 733 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 C17orf67Q0P5P2 114 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 ACTBL2Q562R1 376 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.86□□□□□ -0.35
UBA1-202ENST00000377269 MAMDC2Q7Z304 686 aaPredicted RBP12.86□□□□□ -0.35
UBA1-202ENST00000377269 HOGA1Q86XE5 327 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 BCO1Q9HAY6 547 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 GDF2Q9UK05 429 aaPredicted RBP12.86□□□□□ -0.35
UBA1-202ENST00000377269 VDAC3Q9Y277 283 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 TMED3Q9Y3Q3 217 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 EXPH5Q8NEV8 1989 aa12.86□□□□□ -0.35
UBA1-202ENST00000377269 WIPF3A6NGB9 483 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 SHISA8B8ZZ34 492 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 UMAD1C9J7I0 102 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 TSTD3H0UI37 97 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 H7C1Q1 480 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 GPANK1O95872 356 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 F13BP05160 661 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 PET100P0DJ07 73 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 IGFBP3P17936 291 aaPredicted RBP12.85□□□□□ -0.35
UBA1-202ENST00000377269 TBPP20226 339 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 HRH1P35367 487 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 CCL11P51671 97 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 FAM3AP98173 230 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 SURF2Q15527 256 aaPredicted RBP12.85□□□□□ -0.35
UBA1-202ENST00000377269 DEFB109BQ30KR1 87 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 ABHD17BQ5VST6 288 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 TRAPPC6BQ86SZ2 158 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 ZNF440Q8IYI8 595 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 GPR119Q8TDV5 335 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 MISP3Q96FF7 219 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 GALNT14Q96FL9 552 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 SIGLEC12Q96PQ1 595 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 TMEM14AQ9Y6G1 99 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 ADAP1O75689 374 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 RPS10P46783 165 aaKnown RBP12.85□□□□□ -0.35
UBA1-202ENST00000377269 CYB561P49447 251 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 RAP1AP62834 184 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 CLINT1Q14677 625 aa12.85□□□□□ -0.35
UBA1-202ENST00000377269 RSU1Q15404 277 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms