RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 AZGP1P25311 298 aaKnown RBP11.69□□□□□ -0.54
SEC13-202ENST00000350697 ATP1B3P54709 279 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 LMO4P61968 165 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 TPBGQ13641 420 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 TIMM50Q3ZCQ8 353 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 GPR107Q5VW38 600 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 LIPKQ5VXJ0 399 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 LHFPL2Q6ZUX7 228 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 BIVMQ86UB2 503 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 MS4A15Q8N5U1 240 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 THRSPQ92748 146 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 RAB39BQ96DA2 213 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 OPALINQ96PE5 141 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 METTL17Q9H7H0 456 aaPredicted RBP11.69□□□□□ -0.54
SEC13-202ENST00000350697 POLDIP2Q9Y2S7 368 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.69□□□□□ -0.549e-8■■□□□ 13.1
SEC13-202ENST00000350697 MTORP42345 2549 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 ABCA2Q9BZC7 2435 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 IGKV1-27A0A075B6S5 117 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 TRAV38-1A0A0B4J264 116 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 OOEPA6NGQ2 149 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 LGALS8O00214 317 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 RHBDL1O75783 438 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 INMTO95050 263 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 IGHV2-5P01817 119 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 EGR1P18146 543 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 RAB3AP20336 220 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 MPZP25189 248 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 IL2RGP31785 369 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 CD80P33681 288 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 GZMKP49863 264 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 MTCP1P56278 107 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 KCNJ8Q15842 424 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 ZNF404Q494X3 552 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 ZNF529Q6P280 563 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 ANGPTL5Q86XS5 388 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 ANKRD13BQ86YJ7 626 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 CALHM1Q8IU99 346 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 OR14A2Q96R54 314 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 PKIBQ9C010 78 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 ZNF665Q9H7R5 613 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 PCDHB10Q9UN67 800 aa11.69□□□□□ -0.54
SEC13-202ENST00000350697 ZNF879B4DU55 563 aa11.68□□□□□ -0.54
SEC13-202ENST00000350697 C3orf80F5H4A9 247 aa11.68□□□□□ -0.54
SEC13-202ENST00000350697 AKR7A2O43488 359 aa11.68□□□□□ -0.54
SEC13-202ENST00000350697 MUC1P15941 1255 aaPredicted RBP11.68□□□□□ -0.54
SEC13-202ENST00000350697 CPEP16870 476 aa11.68□□□□□ -0.54
SEC13-202ENST00000350697 MAPK3P27361 379 aaPredicted RBP11.68□□□□□ -0.54
SEC13-202ENST00000350697 GP2P55259 537 aaKnown RBP11.68□□□□□ -0.54
SEC13-202ENST00000350697 HOXA4Q00056 320 aaPredicted RBP11.68□□□□□ -0.54
SEC13-202ENST00000350697 IL24Q13007 206 aa11.68□□□□□ -0.54
SEC13-202ENST00000350697 MICBQ29980 383 aa11.68□□□□□ -0.54
SEC13-202ENST00000350697 TEX36Q5VZQ5 186 aa11.68□□□□□ -0.54
SEC13-202ENST00000350697 SFRP4Q6FHJ7 346 aaPredicted RBP11.68□□□□□ -0.54
SEC13-202ENST00000350697 ASPHD2Q6ICH7 369 aa11.68□□□□□ -0.54
SEC13-202ENST00000350697 C19orf18Q8NEA5 215 aa11.68□□□□□ -0.54
SEC13-202ENST00000350697 DEFB108BQ8NET1 73 aa11.68□□□□□ -0.54
SEC13-202ENST00000350697 DERL3Q96Q80 235 aa11.68□□□□□ -0.54
SEC13-202ENST00000350697 TMEM246Q9BRR3 403 aa11.68□□□□□ -0.54
SEC13-202ENST00000350697 TMED9Q9BVK6 235 aa11.68□□□□□ -0.54
SEC13-202ENST00000350697 PATZ1Q9HBE1 687 aaKnown RBP11.68□□□□□ -0.54
SEC13-202ENST00000350697 TAS2R4Q9NYW5 299 aa11.68□□□□□ -0.54
SEC13-202ENST00000350697 CKLFQ9UBR5 152 aa11.68□□□□□ -0.54
SEC13-202ENST00000350697 TRBV5-7A0A0A0MS05 114 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 CEACAM18A8MTB9 384 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.67□□□□□ -0.54
SEC13-202ENST00000350697 SLC22A1O15245 554 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 MAGEB3O15480 346 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 NDUFA2O43678 99 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 SYNGR1O43759 233 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 NOS1APO75052 506 aaPredicted RBP11.67□□□□□ -0.54
SEC13-202ENST00000350697 HCKP08631 526 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 ACAA1P09110 424 aaPredicted RBP11.67□□□□□ -0.54
SEC13-202ENST00000350697 PGA5P0DJD9 388 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 IGHV4-31P0DP07 118 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 GLRA1P23415 457 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 CPT2P23786 658 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 PSMA1P25786 263 aaKnown RBP11.67□□□□□ -0.54
SEC13-202ENST00000350697 PPP3R1P63098 170 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 TRAM1Q15629 374 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 ACSM3Q53FZ2 586 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 ARMCX4Q5H9R4 360 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 CYB5R2Q6BCY4 276 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 DCDC5Q6ZRR9 648 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 PHC2Q8IXK0 858 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 POC1AQ8NBT0 407 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 OR51A2Q8NGJ7 313 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 C12orf43Q96C57 262 aaKnown RBP11.67□□□□□ -0.54
SEC13-202ENST00000350697 C1orf159Q96HA4 380 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 SMR3AQ99954 134 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 FUNDC2Q9BWH2 189 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 WDR13Q9H1Z4 485 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 DNAJB11Q9UBS4 358 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 MIOXQ9UGB7 285 aa11.67□□□□□ -0.54
SEC13-202ENST00000350697 H3BMQ9 156 aa11.66□□□□□ -0.54
SEC13-202ENST00000350697 GPX5O75715 221 aa11.66□□□□□ -0.54
SEC13-202ENST00000350697 GABARAPO95166 117 aa11.66□□□□□ -0.54
SEC13-202ENST00000350697 LY6G6DO95868 133 aa11.66□□□□□ -0.54
SEC13-202ENST00000350697 IGFBP3P17936 291 aaPredicted RBP11.66□□□□□ -0.54
SEC13-202ENST00000350697 FSTP19883 344 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms