RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 NEUROG1Q92886 237 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 CST11Q9H112 138 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 ATG5Q9H1Y0 275 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 CXXC4Q9H2H0 198 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 RABL2AQ9UBK7 228 aaPredicted RBP20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 RABL2BQ9UNT1 228 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 ZSCAN5BA6NJL1 495 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 VSTM5A8MXK1 200 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 KDM4BO94953 1096 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 HLA-DQB1P01920 261 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 RNF224P0DH78 156 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 PTH2RP49190 550 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 IL24Q13007 206 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 PYHIN1Q6K0P9 492 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 BAIAP2L2Q6UXY1 529 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 FAM89BQ8N5H3 189 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 GDPD1Q8N9F7 314 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 OR10K1Q8NGX5 313 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 PLK3Q9H4B4 646 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 BANF2Q9H503 90 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 DIABLOQ9NR28 239 aa20.93■□□□□ 0.94
GTF2A1-201ENST00000298173 CHD6Q8TD26 2715 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 A0A0A6YYH2 397 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 METTL21EPA6NDL7 271 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 A6NJ64 397 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 F5H5P2 479 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 RAB27BO00194 218 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 CRTAPO75718 401 aaPredicted RBP20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 MPIG6BO95866 241 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 SFTPBP07988 381 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 SRSF1Q07955 248 aaKnown RBP eCLIP20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 ZNF154Q13106 437 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 RSU1Q15404 277 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 HAGHLQ6PII5 290 aaPredicted RBP20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 IZUMO1Q8IYV9 350 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 ACBD4Q8NC06 268 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 FAM222BQ8WU58 562 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 AQP3Q92482 292 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 CCDC32Q9BV29 185 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 TMEM59Q9BXS4 323 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 MTCH1Q9NZJ7 389 aa20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 RALYQ9UKM9 306 aaKnown RBP20.92■□□□□ 0.94
GTF2A1-201ENST00000298173 PYCARD-AS1I3L0S3 204 aa20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 SYNGR1O43759 233 aa20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 PTBP3O95758 552 aaKnown RBP20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 MGMTP16455 207 aa20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 SERPINA2P20848 420 aa20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 RPS27AP62979 156 aaKnown RBP20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 IFITM3Q01628 133 aa20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 C11orf53Q8IXP5 236 aa20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 MKXQ8IYA7 352 aa20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 SCCPDHQ8NBX0 429 aa20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 PIK3IP1Q96FE7 263 aa20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 TM2D1Q9BX74 207 aa20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 TLNRD1Q9H1K6 362 aa20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 ELL3Q9HB65 397 aaPredicted RBP20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 PALMDQ9NP74 551 aa20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 C14orf119Q9NWQ9 140 aa20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 NKIRAS2Q9NYR9 191 aa20.91■□□□□ 0.94
GTF2A1-201ENST00000298173 A0A0A6YYD4 124 aa20.9■□□□□ 0.94
GTF2A1-201ENST00000298173 PLSCR5A0PG75 271 aa20.9■□□□□ 0.94
GTF2A1-201ENST00000298173 APOBEC3AP31941 199 aaPredicted RBP20.9■□□□□ 0.94
GTF2A1-201ENST00000298173 SERPINF1P36955 418 aa20.9■□□□□ 0.94
GTF2A1-201ENST00000298173 CD200P41217 278 aa20.9■□□□□ 0.94
GTF2A1-201ENST00000298173 NPBWR2P48146 333 aa20.9■□□□□ 0.94
GTF2A1-201ENST00000298173 MOGAT2Q3SYC2 334 aa20.9■□□□□ 0.94
GTF2A1-201ENST00000298173 TMEM69Q5SWH9 247 aa20.9■□□□□ 0.94
GTF2A1-201ENST00000298173 ELP2Q6IA86 826 aa20.9■□□□□ 0.94
GTF2A1-201ENST00000298173 OR2Z1Q8NG97 314 aa20.9■□□□□ 0.94
GTF2A1-201ENST00000298173 MRPS7Q9Y2R9 242 aaKnown RBP20.9■□□□□ 0.94
GTF2A1-201ENST00000298173 DOPEY1Q5JWR5 2465 aa20.9■□□□□ 0.94
GTF2A1-201ENST00000298173 FLNCQ14315 2725 aa20.9■□□□□ 0.94
GTF2A1-201ENST00000298173 ABCA4P78363 2273 aa20.9■□□□□ 0.94
GTF2A1-201ENST00000298173 J3QT63 122 aa20.89■□□□□ 0.94
GTF2A1-201ENST00000298173 CTDSPLO15194 276 aa20.89■□□□□ 0.94
GTF2A1-201ENST00000298173 HTR3BO95264 441 aa20.89■□□□□ 0.94
GTF2A1-201ENST00000298173 CHRM2P08172 466 aa20.89■□□□□ 0.94
GTF2A1-201ENST00000298173 FAM189A2Q15884 450 aa20.89■□□□□ 0.94
GTF2A1-201ENST00000298173 BAK1Q16611 211 aa20.89■□□□□ 0.94
GTF2A1-201ENST00000298173 ZNF672Q499Z4 452 aaPredicted RBP20.89■□□□□ 0.94
GTF2A1-201ENST00000298173 PYDC2Q56P42 97 aa20.89■□□□□ 0.94
GTF2A1-201ENST00000298173 RAB12Q6IQ22 244 aa20.89■□□□□ 0.94
GTF2A1-201ENST00000298173 SNX29P2Q8IUI4 249 aa20.89■□□□□ 0.94
GTF2A1-201ENST00000298173 MRPS24Q96EL2 167 aaKnown RBP20.89■□□□□ 0.94
GTF2A1-201ENST00000298173 GAL3ST1Q99999 423 aa20.89■□□□□ 0.94
GTF2A1-201ENST00000298173 NUDT16L1Q9BRJ7 211 aaKnown RBP20.89■□□□□ 0.94
GTF2A1-201ENST00000298173 NICN1Q9BSH3 213 aa20.89■□□□□ 0.94
GTF2A1-201ENST00000298173 PCDHB16Q9NRJ7 776 aa20.89■□□□□ 0.94
GTF2A1-201ENST00000298173 CISD1Q9NZ45 108 aaKnown RBP20.89■□□□□ 0.94
GTF2A1-201ENST00000298173 CHD3Q12873 2000 aaKnown RBP20.89■□□□□ 0.93
GTF2A1-201ENST00000298173 RHBDL1O75783 438 aa20.89■□□□□ 0.93
GTF2A1-201ENST00000298173 UPK1BO75841 260 aa20.89■□□□□ 0.93
GTF2A1-201ENST00000298173 CSTBP04080 98 aaKnown RBP20.89■□□□□ 0.93
GTF2A1-201ENST00000298173 ACAA1P09110 424 aaPredicted RBP20.89■□□□□ 0.93
GTF2A1-201ENST00000298173 GTF2F2P13984 249 aa20.89■□□□□ 0.93
GTF2A1-201ENST00000298173 TAS2R20P59543 309 aa20.89■□□□□ 0.93
GTF2A1-201ENST00000298173 PITPNAQ00169 270 aa20.89■□□□□ 0.93
GTF2A1-201ENST00000298173 MZT1Q08AG7 82 aa20.89■□□□□ 0.93
GTF2A1-201ENST00000298173 EFNB3Q15768 340 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms