RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 PEA15Q15121 130 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 TGIF1Q15583 401 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 SLAMF6Q96DU3 332 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 RAB3CQ96E17 227 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 C2orf50Q96LR7 162 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 NICN1Q9BSH3 213 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 PLA2G3Q9NZ20 509 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 LRFN1Q9P244 771 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 FAM96BQ9Y3D0 163 aa16.03■□□□□ 0.16
PDLIM3-201ENST00000284767 RNASEK-C17orf49H0YIS7 233 aa16.02■□□□□ 0.16
PDLIM3-201ENST00000284767 HIST1H1DP16402 221 aaKnown RBP16.02■□□□□ 0.16
PDLIM3-201ENST00000284767 NFYBP25208 207 aa16.02■□□□□ 0.16
PDLIM3-201ENST00000284767 NPY4RP50391 375 aa16.02■□□□□ 0.16
PDLIM3-201ENST00000284767 SLC9A3R2Q15599 337 aa16.02■□□□□ 0.16
PDLIM3-201ENST00000284767 FAM189A2Q15884 450 aa16.02■□□□□ 0.16
PDLIM3-201ENST00000284767 DEFB124Q8NES8 71 aa16.02■□□□□ 0.16
PDLIM3-201ENST00000284767 POLR1DQ9Y2S0 133 aa16.02■□□□□ 0.16
PDLIM3-201ENST00000284767 SFTA3P0C7M3 94 aa16.02■□□□□ 0.15
PDLIM3-201ENST00000284767 SLC25A47Q6Q0C1 308 aa16.02■□□□□ 0.15
PDLIM3-201ENST00000284767 LINC00696Q6ZRV3 163 aa16.02■□□□□ 0.15
PDLIM3-201ENST00000284767 TMEM200AQ86VY9 491 aa16.02■□□□□ 0.15
PDLIM3-201ENST00000284767 C2CD4CQ8TF44 421 aa16.02■□□□□ 0.15
PDLIM3-201ENST00000284767 OCSTAMPQ9BR26 566 aa16.02■□□□□ 0.15
PDLIM3-201ENST00000284767 PIGQQ9BRB3 760 aa16.02■□□□□ 0.15
PDLIM3-201ENST00000284767 OR2S2Q9NQN1 319 aa16.02■□□□□ 0.15
PDLIM3-201ENST00000284767 ASH2LQ9UBL3 628 aa16.02■□□□□ 0.15
PDLIM3-201ENST00000284767 POMT1Q9Y6A1 747 aa16.02■□□□□ 0.15
PDLIM3-201ENST00000284767 URB1O60287 2271 aaKnown RBP16.02■□□□□ 0.15
PDLIM3-201ENST00000284767 A0A0A6YYD4 124 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 SPAARA0A1B0GVQ0 90 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 RER1O15258 196 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 ZNF20P17024 532 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 ITGA3P26006 1051 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 SUCLG1P53597 346 aaKnown RBP16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 RAB5BP61020 215 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 RAC1P63000 192 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 SUPT4H1P63272 117 aaKnown RBP16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 RTN4RL2Q86UN3 420 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 POC1AQ8NBT0 407 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 KCNG3Q8TAE7 436 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 MRPS28Q9Y2Q9 187 aaKnown RBP16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 NCOA6Q14686 2063 aaPredicted RBP16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 COLCA2A8K830 154 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 CD5P06127 495 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 EIF3IQ13347 325 aaKnown RBP16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 ZNF239Q16600 458 aaKnown RBP16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 SWI5Q1ZZU3 235 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 ANKRD55Q3KP44 614 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 PLAC9Q5JTB6 97 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 DCAF10Q5QP82 559 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 GLIPR1L1Q6UWM5 242 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 OR5H2Q8NGV7 314 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 METTL8Q9H825 291 aaKnown RBP16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 MOB1AQ9H8S9 216 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 SMCO4Q9NRQ5 59 aa16.01■□□□□ 0.15
PDLIM3-201ENST00000284767 LAMA5O15230 3695 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 SLC2A1P11166 492 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 SRD5A2P31213 254 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 IL15RAQ13261 267 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 TSC22D1Q15714 1073 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 HIST3H3Q16695 136 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 PLXDC2Q6UX71 529 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 LHFPL1Q86WI0 220 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 BHLHE23Q8NDY6 225 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 CPNE2Q96FN4 548 aaPredicted RBP16■□□□□ 0.15
PDLIM3-201ENST00000284767 OR10C1Q96KK4 312 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 RTBDNQ9BSG5 229 aaPredicted RBP16■□□□□ 0.15
PDLIM3-201ENST00000284767 GPR87Q9BY21 358 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 TAF9BQ9HBM6 251 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 MEMO1Q9Y316 297 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 MFNGO00587 321 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 CDC14BO60729 498 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 NEURL1O76050 574 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 MPIG6BO95866 241 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 FKBP2P26885 142 aaKnown RBP16■□□□□ 0.15
PDLIM3-201ENST00000284767 GDF1P27539 372 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 SULT1A2P50226 295 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 RAB32Q13637 225 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 NSUN5P2Q63ZY6 315 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 IL22RA1Q8N6P7 574 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 C15orf54Q8N8G6 183 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 ZNF837Q96EG3 531 aaPredicted RBP16■□□□□ 0.15
PDLIM3-201ENST00000284767 C1orf147Q96MC9 270 aaPredicted RBP16■□□□□ 0.15
PDLIM3-201ENST00000284767 PARP11Q9NR21 331 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 PCDHGA1Q9Y5H4 931 aa16■□□□□ 0.15
PDLIM3-201ENST00000284767 PRRC2CQ9Y520 2896 aaKnown RBP16■□□□□ 0.15
PDLIM3-201ENST00000284767 RIF1Q5UIP0 2472 aaKnown RBP16■□□□□ 0.15
PDLIM3-201ENST00000284767 C21orf140B9A014 251 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 NPIPA2E9PIF3 369 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 NPIPA3F8WFD2 350 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 LRP3O75074 770 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 MED6O75586 246 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 FCGR3AP08637 254 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 ZNF17P17021 662 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 NTF4P34130 210 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 LPAR6P43657 344 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 FOXO1Q12778 655 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 GGNQ86UU5 652 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 TMEM104Q8NE00 496 aa15.99■□□□□ 0.15
PDLIM3-201ENST00000284767 OR9K2Q8NGE7 335 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms