RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 RLFQ13129 1914 aa12.11□□□□□ -0.47
NPC1-201ENST00000269228 OR5B21A6NL26 309 aa12.11□□□□□ -0.47
NPC1-201ENST00000269228 PCMT1P22061 227 aa12.11□□□□□ -0.47
NPC1-201ENST00000269228 TLE4Q04727 773 aa12.11□□□□□ -0.47
NPC1-201ENST00000269228 CCDC190Q86UF4 302 aa12.11□□□□□ -0.47
NPC1-201ENST00000269228 OR10AD1Q8NGE0 317 aa12.11□□□□□ -0.47
NPC1-201ENST00000269228 OSGIN2Q9Y236 505 aa12.11□□□□□ -0.47
NPC1-201ENST00000269228 PTP4A3O75365 173 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 UPK3AO75631 287 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 DFFBO76075 338 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 YIF1AO95070 293 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 ACP1P24666 158 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 RAB13P51153 203 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 RAB5BP61020 215 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 PCOLCEQ15113 449 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 LINC00303Q3SY05 128 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 MFSD4AQ8N468 514 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 LOC101059948A0A1B0GTJ6 334 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 CT45A6P0DMU7 189 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 CT45A5P0DMU8 189 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 CT45A7P0DMV0 189 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 SFTPCP11686 197 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 TMPRSS3P57727 454 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 SSBP1Q04837 148 aaKnown RBP12.1□□□□□ -0.47
NPC1-201ENST00000269228 CT45A1Q5HYN5 189 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 SLC51BQ86UW2 128 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 TMEM229BQ8NBD8 167 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 CT45A3Q8NHU0 189 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 FBXW5Q969U6 566 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 TRMT61AQ96FX7 289 aaKnown RBP12.1□□□□□ -0.47
NPC1-201ENST00000269228 CHST6Q9GZX3 395 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 DEFB108AA8MXU0 73 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 GDF9O60383 454 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 ZNF883P0CG24 379 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 RBMS3Q6XE24 437 aaKnown RBP12.1□□□□□ -0.47
NPC1-201ENST00000269228 CXXC4Q9H2H0 198 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 SLC17A5Q9NRA2 495 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 TINAGQ9UJW2 476 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 DOCK6Q96HP0 2047 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 C16orf97H3BN30 126 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 K7ESF4 209 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 GCM2O75603 506 aaPredicted RBP12.1□□□□□ -0.47
NPC1-201ENST00000269228 SEMG1P04279 462 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 GIPP09681 153 aaPredicted RBP12.1□□□□□ -0.47
NPC1-201ENST00000269228 ZNF816Q0VGE8 651 aaPredicted RBP12.1□□□□□ -0.47
NPC1-201ENST00000269228 SLC26A10Q8NG04 563 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 SSX3Q99909 188 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 WFDC6Q9BQY6 131 aa12.1□□□□□ -0.47
NPC1-201ENST00000269228 ZNF354AO60765 605 aaPredicted RBP12.09□□□□□ -0.47
NPC1-201ENST00000269228 IGHA1P01876 353 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 ADRA2CP18825 462 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 C17orf107Q6ZR85 190 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 MAGT1Q9H0U3 335 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 TREM2Q9NZC2 230 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 KCNE5Q9UJ90 142 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 PDCD11Q14690 1871 aaKnown RBP12.09□□□□□ -0.47
NPC1-201ENST00000269228 TUBAL3A6NHL2 446 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 OGG1O15527 345 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 SSSCA1O60232 199 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 PPT1P50897 306 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 MOB3BQ86TA1 216 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 SLC35E1Q96K37 410 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 CCDC88CQ9P219 2028 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 CACNA1GO43497 2377 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 ALPK2Q86TB3 2170 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 CTAG2O75638 210 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 IAPPP10997 89 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 GNG10P50151 68 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 ELLP55199 621 aaPredicted RBP12.09□□□□□ -0.47
NPC1-201ENST00000269228 SLC16A12Q6ZSM3 486 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 LRRTM1Q86UE6 522 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 ARRDC1Q8N5I2 433 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 CTHRC1Q96CG8 243 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 DAZAP1Q96EP5 407 aaKnown RBP12.09□□□□□ -0.47
NPC1-201ENST00000269228 GUCD1Q96NT3 240 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 PFDN5Q99471 154 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 RAB1BQ9H0U4 201 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 KCNK15Q9H427 330 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 M0R1X1 148 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 PDCD6O75340 191 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 DXOO77932 396 aaKnown RBP12.09□□□□□ -0.47
NPC1-201ENST00000269228 ASAH2BP0C7U1 165 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 ZNF528Q3MIS6 628 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 OR52B4Q8NGK2 314 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 OR14K1Q8NGZ2 314 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 FRZBQ92765 325 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 UHRF2Q96PU4 802 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 GREB1Q4ZG55 1949 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 GPR179Q6PRD1 2367 aa12.09□□□□□ -0.47
NPC1-201ENST00000269228 CDX4O14627 284 aaPredicted RBP12.08□□□□□ -0.47
NPC1-201ENST00000269228 HBE1P02100 147 aa12.08□□□□□ -0.47
NPC1-201ENST00000269228 LYG2Q86SG7 212 aa12.08□□□□□ -0.47
NPC1-201ENST00000269228 OR6S1Q8NH40 331 aa12.08□□□□□ -0.47
NPC1-201ENST00000269228 RNF133Q8WVZ7 376 aa12.08□□□□□ -0.47
NPC1-201ENST00000269228 ZDHHC16Q969W1 377 aa12.08□□□□□ -0.47
NPC1-201ENST00000269228 PINX1Q96BK5 328 aaKnown RBP12.08□□□□□ -0.47
NPC1-201ENST00000269228 CMTM3Q96MX0 182 aa12.08□□□□□ -0.47
NPC1-201ENST00000269228 AKIRIN1Q9H9L7 192 aaPredicted RBP12.08□□□□□ -0.47
NPC1-201ENST00000269228 KCNIP2Q9NS61 270 aa12.08□□□□□ -0.47
NPC1-201ENST00000269228 ACACAQ13085 2346 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms