RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.35□□□□□ -0.43
UPK3A-201ENST00000216211 CLVS1Q8IUQ0 354 aaPredicted RBP12.35□□□□□ -0.43
UPK3A-201ENST00000216211 PIP4P2Q8N4L2 257 aa12.35□□□□□ -0.43
UPK3A-201ENST00000216211 LY6G5BQ8NDX9 201 aa12.35□□□□□ -0.43
UPK3A-201ENST00000216211 OR5T2Q8NGG2 359 aa12.35□□□□□ -0.43
UPK3A-201ENST00000216211 THEM6Q8WUY1 208 aa12.35□□□□□ -0.43
UPK3A-201ENST00000216211 RORBQ92753 470 aa12.35□□□□□ -0.43
UPK3A-201ENST00000216211 ITPKCQ96DU7 683 aa12.35□□□□□ -0.43
UPK3A-201ENST00000216211 MICU1Q9BPX6 476 aa12.35□□□□□ -0.43
UPK3A-201ENST00000216211 TLNRD1Q9H1K6 362 aa12.35□□□□□ -0.43
UPK3A-201ENST00000216211 KPTNQ9Y664 436 aa12.35□□□□□ -0.43
UPK3A-201ENST00000216211 VWFP04275 2813 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 IRGMA1A4Y4 181 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 CCDC160A6NGH7 325 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 ANXA2P2A6NMY6 339 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 ZNF850A8MQ14 1090 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 PRR23D1E9PI22 279 aaPredicted RBP12.34□□□□□ -0.43
UPK3A-201ENST00000216211 PRODHO43272 600 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 NDUFB3O43676 98 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 INMTO95050 263 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 PRR23D2P0DMB1 279 aaPredicted RBP12.34□□□□□ -0.43
UPK3A-201ENST00000216211 SELLP14151 372 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 AMY2BP19961 511 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 PAICSP22234 425 aaKnown RBP12.34□□□□□ -0.43
UPK3A-201ENST00000216211 ACKR3P25106 362 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 C21orf33P30042 268 aaPredicted RBP12.34□□□□□ -0.43
UPK3A-201ENST00000216211 IER3P46695 156 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 TMBIM6P55061 237 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 GP2P55259 537 aaKnown RBP12.34□□□□□ -0.43
UPK3A-201ENST00000216211 DLX1P56177 255 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 KRTAP10-3P60369 221 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 DEFA6Q01524 100 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 PRB3Q04118 309 aaPredicted RBP12.34□□□□□ -0.43
UPK3A-201ENST00000216211 ZNF91Q05481 1191 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 AADACL4Q5VUY2 407 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 STUMQ69YW2 141 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 PLBD1Q6P4A8 553 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 BRICD5Q6PL45 260 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 RHOUQ7L0Q8 258 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 LDLRAD3Q86YD5 345 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 OTOSQ8NHW6 89 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 PIGCQ92535 297 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 DYRK2Q92630 601 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 RPL3LQ92901 407 aaKnown RBP12.34□□□□□ -0.43
UPK3A-201ENST00000216211 TMEM80Q96HE8 168 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 LYZL4Q96KX0 146 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 RTL8AQ9BWD3 113 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 FGF23Q9GZV9 251 aaPredicted RBP12.34□□□□□ -0.43
UPK3A-201ENST00000216211 WDR13Q9H1Z4 485 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 SIRT7Q9NRC8 400 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 SNTG1Q9NSN8 517 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 DNAJB11Q9UBS4 358 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 MPC1Q9Y5U8 109 aa12.34□□□□□ -0.43
UPK3A-201ENST00000216211 A0A1B0GVI7 797 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 GPR137BO60478 399 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 FADS2O95864 444 aaKnown RBP12.33□□□□□ -0.44
UPK3A-201ENST00000216211 TGM4P49221 684 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 KLHL22Q53GT1 634 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 LRRC10Q5BKY1 277 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 GPR107Q5VW38 600 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 NXNL2Q5VZ03 156 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 BCDIN3DQ7Z5W3 292 aaKnown RBP12.33□□□□□ -0.44
UPK3A-201ENST00000216211 FTMTQ8N4E7 242 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 OR8B12Q8NGG6 310 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 OR5P3Q8WZ94 311 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 H1FXQ92522 213 aaKnown RBP12.33□□□□□ -0.44
UPK3A-201ENST00000216211 RFKQ969G6 155 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 C12orf43Q96C57 262 aaKnown RBP12.33□□□□□ -0.44
UPK3A-201ENST00000216211 ISOC1Q96CN7 298 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 CITED1Q99966 193 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 DCTN5Q9BTE1 182 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 RGCCQ9H4X1 137 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 FGF20Q9NP95 211 aaPredicted RBP12.33□□□□□ -0.44
UPK3A-201ENST00000216211 HAO2Q9NYQ3 351 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 KLHDC2Q9Y2U9 406 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 FAM96BQ9Y3D0 163 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 RNF114Q9Y508 228 aa12.33□□□□□ -0.44
UPK3A-201ENST00000216211 A0A1W2PRD5 423 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 A0A1W2PRF3 423 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 A0A1W2PRM7 423 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 AKR7A2O43488 359 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 RPL15P61313 204 aaKnown RBP12.32□□□□□ -0.44
UPK3A-201ENST00000216211 RAB40BQ12829 278 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 KLRD1Q13241 179 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 TMED1Q13445 227 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 ATPAF1Q5TC12 328 aaPredicted RBP12.32□□□□□ -0.44
UPK3A-201ENST00000216211 CPOQ8IVL8 374 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 CMTM4Q8IZR5 234 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 Q8N7P7 452 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 BBS1Q8NFJ9 593 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 OR10Z1Q8NGY1 313 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 LINC01006Q8NI28 216 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 HPSE2Q8WWQ2 592 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 YIPF6Q96EC8 236 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 RNF170Q96K19 258 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 GAFA1Q96PS6 74 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 BCL7BQ9BQE9 202 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 YIPF3Q9GZM5 350 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 PTTG2Q9NZH5 202 aa12.32□□□□□ -0.44
UPK3A-201ENST00000216211 ZNF391Q9UJN7 358 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms