RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 P01665 111 aa12.87□□□□□ -0.35
Col2a1-202ENSMUST00000088355 P01666 111 aa12.87□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Elk1P41969 429 aa12.87□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Olfr733Q14AK5 308 aa12.87□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Defb46Q4QY34 57 aa12.87□□□□□ -0.35
Col2a1-202ENSMUST00000088355 ChdhQ8BJ64 596 aa12.87□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Glo1Q9CPU0 184 aa12.87□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Gm28557A0A087WQQ0 336 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Gm3676D3Z236 184 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Gm2663F6R7E8 247 aaKnown RBP12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Gm42421F6X8D5 166 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Gm21767J3QPV5 180 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Vmn1r57K7N731 310 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Alx4O35137 399 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 CpeQ00493 476 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Znf8Q8BGV5 572 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 1810009J06RikQ9CPN7 247 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Srxn1Q9D975 136 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Tmem37Q9JJV3 211 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 SclyQ9JLI6 432 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Reep6Q9JM62 201 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Exo1Q9QZ11 837 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Gm13769A2ATW2 309 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Tmem74bA2AU34 232 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Adap1E9PY16 374 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Vmn2r16E9Q025 850 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Rab3dP35276 219 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Rab19P35294 217 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Srp9P49962 86 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 B4galnt1Q09200 533 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 CrhbpQ60571 322 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Gm2aQ60648 193 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Rps19bp1Q8C6B9 143 aaKnown RBP12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Angptl6Q8R0Z6 457 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Vmn1r19Q8R2C7 308 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Olfr1240Q8VG73 314 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Pla2g12aQ9EPR2 192 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 RfxankQ9Z205 269 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Trbc2A0A075B5J4 173 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Gm42957D6RFQ2 366 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Olfr419E9Q0Y7 313 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Vmn1r129E9QA94 307 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Vmn1r159K7N701 305 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Gm8720K9J7F4 307 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Tgfbr3O88393 850 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 P01851 173 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Rps27aP62983 156 aaKnown RBP12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Uba52P62984 128 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Wdr34Q5U4F6 535 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Foxb1Q64732 325 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Pcp4l1Q6W8Q3 68 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Slc5a7Q8BGY9 580 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Ccdc58Q8R3Q6 144 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Olfr1277Q8VF41 303 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Six6Q9QZ28 246 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 CrebbpP45481 2441 aa12.86□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Hes1P35428 282 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Phox2aQ62066 280 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Serinc5Q8BHJ6 461 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Gpr137bQ8BNQ3 385 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Actrt3Q8BXF8 369 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Chrnb4Q8R493 495 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Rab27bQ99P58 218 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Mrpl24Q9CQ06 216 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Slc10a6Q9CXB2 373 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Tmem196V9GX04 182 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Gm6096D3YTY6 151 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Mfsd4b5E9PYY6 479 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Prdm13E9PZZ1 754 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Prr23a1G3UW32 258 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Mtco2P00405 227 aaKnown RBP12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Csf3P09920 208 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Cdk5r1P61809 307 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Rab11aP62492 216 aaKnown RBP12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Tcf7Q00417 419 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Olfr1428Q0VDY1 314 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Gnb3Q61011 340 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 CybaQ61462 192 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 PcnpQ6P8I4 178 aaKnown RBP12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Cpeb4Q7TN98 729 aaKnown RBP12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Olfr222Q7TS30 318 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Atg4dQ8BGV9 474 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Agpat2Q8K3K7 278 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Pcdh1F7BJK1 1077 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Vmn1r60G3UY47 300 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Ccl20O89093 97 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 4933415F23RikQ14BX6 153 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Alkal2Q80UG6 151 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Prdx6bQ8BG37 224 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Cd99l2Q8BIF0 237 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Creb5Q8K1L0 357 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Abhd17cQ8VCV1 320 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Phospho2Q9D9M5 241 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Ubl3Q9Z2M6 117 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Slc38a6G3UVW3 457 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Slc6a9P28571 692 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Rnf133Q14B02 382 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Crebl2Q32M00 123 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Tnfrsf8Q60846 498 aa12.85□□□□□ -0.35
Col2a1-202ENSMUST00000088355 Glra1Q64018 457 aa12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 63.7 ms