RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Q8C3M9 231 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Q99K99 313 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 SmagpQ99KC7 97 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Tusc1Q673H1 205 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Bles03Q8VD62 251 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Cacna1bO55017 2327 aa10.9□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ube2dnl2A2AFH2 155 aa10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr250E9PV37 331 aa10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr376E9Q4M1 320 aa10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 Klk1b16P04071 261 aa10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr486Q8VFD0 314 aa10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 Tmem218Q9CQ44 115 aa10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 ManfQ9CXI5 179 aaKnown RBP10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 PbkQ9JJ78 330 aa10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 Heatr1G3X9B1 2143 aaKnown RBP10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr1109A2AT96 312 aa10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 Raet1cO08604 253 aa10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gpr85P60894 370 aa10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 Reg2Q08731 173 aa10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 Abhd14bQ8VCR7 210 aa10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr1424Q8VFV1 313 aa10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 Cotl1Q9CQI6 142 aa10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 Slc22a5Q9Z0E8 557 aa10.9□□□□□ -0.67
Trim56-201ENSMUST00000054384 Scgb1b15A0A087WP50 93 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm20489A2AGH5 449 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr209L7N1X3 305 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 NrasP08556 189 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ca6P18761 317 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Lhx4P53776 390 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr884Q7TRE1 309 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr510Q8VEW6 314 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr1453Q8VFX0 307 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ogfod3Q9D136 315 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 ZxdbA2CE44 873 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Vmn1r60G3UY47 300 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 IfngP01580 155 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Fcgr2P08101 330 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Rasd2P63032 266 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Cyb561Q60720 250 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Paqr9Q6TCG2 375 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Tmem56Q8CGF5 276 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr790Q8VGJ3 322 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 CsQ9CZU6 464 aaKnown RBP10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Cxcr6Q9EQ16 351 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Slc2a8Q9JIF3 477 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Zfp964B2RR88 472 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Meox1P32442 253 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Cd244Q07763 397 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Slc5a12Q49B93 619 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 PirtQ8BFY0 135 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Mob3cQ8BJG4 216 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ndrg4Q8BTG7 352 aaKnown RBP10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Glcci1Q8K3I9 537 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Tm4sf5Q91XF2 196 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 BlvrbQ923D2 206 aaKnown RBP10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Mlf2Q99KX1 247 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Arl13aQ9D416 372 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm3512L7N206 146 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Polr2iP60898 125 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Nrsn2Q5HZK2 202 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Sft2d1Q5SSN7 159 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Il15raQ60819 263 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ear6Q923L7 155 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Maf1Q9D0U6 258 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Tmem30cQ9D4D7 342 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gpx8Q9D7B7 209 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Saxo1B1AXP3 476 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Mmp27D3YV89 551 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Adam10O35598 749 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 P01851 173 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 P01852 173 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Tgfb1P04202 390 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Hs3st2Q673U1 367 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 IfnkQ7TSL0 199 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr1377Q8VGH1 307 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr1270Q8VGP3 304 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 MrnipQ9D1F5 335 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Pdcd1lg2Q9WUL5 247 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Havcr1Q5QNS5 305 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Shisa7Q8C3Q5 558 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Amdhd2Q8JZV7 409 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Foxo1Q9R1E0 652 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Scn9aQ62205 1984 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr203L7N205 307 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gfra2O08842 464 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Map2k6P70236 334 aaKnown RBP10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 StumQ0VBF8 141 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Elavl4Q61701 385 aaKnown RBP10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 March1Q6NZQ8 289 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Lancl3Q8CD19 420 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Bap18Q9DCT6 171 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Aloxe3Q9WV07 711 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Bcl9lQ67FY2 1494 aa10.89□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr112Q8C0S2 320 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Ms4a6bQ99N09 244 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 NagkQ9QZ08 343 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Gm13723A0A1L1SUP2 315 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Tmem233D3Z1U7 110 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 Olfr568E9Q554 313 aa10.88□□□□□ -0.67
Trim56-201ENSMUST00000054384 AldocP05063 363 aa10.88□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 63 ms