RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 RAP1BP61224 184 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 RAP1AP62834 184 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 SCN1BQ07699 218 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 SPOCK1Q08629 439 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 CBX3Q13185 183 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 SF3B4Q15427 424 aaKnown RBP eCLIP5.19□□□□□ -1.585e-10■□□□□ 8.2
ATM-229ENST00000639953 FCN2Q15485 313 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 C2orf68Q2NKX9 166 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 TBRG1Q3YBR2 411 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 PDSS1Q5T2R2 415 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 ZNF626Q68DY1 528 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 TMEM225Q6GV28 225 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 LAMTOR1Q6IAA8 161 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 C11orf87Q6NUJ2 197 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 Q6ZTK2 550 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 FOXL2NBQ6ZUU3 175 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 KCTD20Q7Z5Y7 419 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 KRT77Q7Z794 578 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 GPAT4Q86UL3 456 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 LRRC28Q86X40 367 aaPredicted RBP5.19□□□□□ -1.58
ATM-229ENST00000639953 UEVLDQ8IX04 471 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 OR5AS1Q8N127 324 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 PAQR4Q8N4S7 273 aaPredicted RBP5.19□□□□□ -1.58
ATM-229ENST00000639953 ZNF676Q8N7Q3 588 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 CNEP1R1Q8N9A8 125 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 ZBTB8BQ8NAP8 495 aaPredicted RBP5.19□□□□□ -1.58
ATM-229ENST00000639953 NOXO1Q8NFA2 376 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 OR4D10Q8NGI6 311 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 OR4D6Q8NGJ1 314 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 OR6X1Q8NH79 312 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 SYNPRQ8TBG9 265 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 ABHD3Q8WU67 409 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 RNF133Q8WVZ7 376 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 ACOT12Q8WYK0 555 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 FGGYQ96C11 551 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 PPP1R14BQ96C90 147 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 DDIT4LQ96D03 193 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 CMBLQ96DG6 245 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 SLAMF6Q96DU3 332 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 FBXO17Q96EF6 278 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 ZC3HAV1LQ96H79 300 aaKnown RBP5.19□□□□□ -1.58
ATM-229ENST00000639953 C1orf43Q9BWL3 253 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 PRRG4Q9BZD6 226 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 HDHD2Q9H0R4 259 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 OPN3Q9H1Y3 402 aaPredicted RBP5.19□□□□□ -1.58
ATM-229ENST00000639953 RNF122Q9H9V4 155 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 PLEKHA1Q9HB21 404 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 RANGRFQ9HD47 186 aaPredicted RBP5.19□□□□□ -1.58
ATM-229ENST00000639953 HRASLSQ9HDD0 168 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 RBFOX1Q9NWB1 397 aaKnown RBP5.19□□□□□ -1.58
ATM-229ENST00000639953 ZNF581Q9P0T4 197 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 ABRACLQ9P1F3 81 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 KLHL9Q9P2J3 617 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 KLK11Q9UBX7 282 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 ZNF221Q9UK13 617 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 GTF2A1LQ9UNN4 478 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 B3GALT5Q9Y2C3 310 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 ICE1Q9Y2F5 2266 aa5.19□□□□□ -1.58
ATM-229ENST00000639953 HRNRQ86YZ3 2850 aaPredicted RBP5.19□□□□□ -1.58
ATM-229ENST00000639953 RP1L1Q8IWN7 2480 aaPredicted RBP5.19□□□□□ -1.58
ATM-229ENST00000639953 INTS1Q8N201 2190 aaKnown RBP5.18□□□□□ -1.58
ATM-229ENST00000639953 TRAV6A0A075B6T7 132 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 IGKV1-9A0A0C4DH69 117 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 LOC102725191A0A1B0GVB3 256 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 LOC107986453A0A1B0GWG9 222 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 A0A1W2PP11 408 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 NPIPB13A6NJU9 1138 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 NPIPB4C9JG80 1138 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 G3V3Q6 166 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 SULT2B1O00204 365 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 PMS2P2O95744 297 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 SERPINA3P01011 423 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 ALDOBP05062 364 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 TACSTD2P09758 323 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 CXCL3P19876 107 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 SLC6A1P30531 599 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 DCTDP32321 178 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 RAD52P43351 418 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 MMP15P51511 669 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 ZNF133P52736 654 aaPredicted RBP5.18□□□□□ -1.58
ATM-229ENST00000639953 TAS2R20P59543 309 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 HIST1H3AP68431 136 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 QRFPP83859 136 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 TNK1Q13470 666 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 HABP2Q14520 560 aaPredicted RBP5.18□□□□□ -1.58
ATM-229ENST00000639953 GUSBP1Q15486 140 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 SGCAQ16586 387 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 SLC22A6Q4U2R8 563 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 UBE2NLQ5JXB2 153 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 HIST2H3PS2Q5TEC6 136 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 ZNF57Q68EA5 555 aaPredicted RBP5.18□□□□□ -1.58
ATM-229ENST00000639953 PYHIN1Q6K0P9 492 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 ZNF66Q6ZN08 573 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 HIST2H3AQ71DI3 136 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 NUFIP2Q7Z417 695 aaKnown RBP5.18□□□□□ -1.58
ATM-229ENST00000639953 TUSC5Q8IXB3 177 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 ELMOD2Q8IZ81 293 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 ADPRHL1Q8NDY3 354 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 BEST4Q8NFU0 473 aa5.18□□□□□ -1.58
ATM-229ENST00000639953 OR11H7Q8NGC8 314 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms