RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 E9PLN8 166 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 CRTAPO75718 401 aaPredicted RBP12.87□□□□□ -0.35
CDH1-213ENST00000612417 CNR1P21554 472 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 FPR2P25090 351 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 OTX1P32242 354 aaPredicted RBP12.87□□□□□ -0.35
CDH1-213ENST00000612417 THBS4P35443 961 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 CSNK1A1P48729 337 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 HIST1H3AP68431 136 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 AIMP2Q13155 320 aaKnown RBP12.87□□□□□ -0.35
CDH1-213ENST00000612417 BTN1A1Q13410 526 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 SNTB1Q13884 538 aaKnown RBP12.87□□□□□ -0.35
CDH1-213ENST00000612417 FAM74A1Q5RGS3 127 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 HIST2H3PS2Q5TEC6 136 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 NSUN5P2Q63ZY6 315 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 HIST2H3AQ71DI3 136 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 KCTD9Q7L273 389 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 LHFPL1Q86WI0 220 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 GJC3Q8NFK1 279 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 STOML3Q8TAV4 291 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 TMEM230Q96A57 120 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 ARHGAP5-AS1Q96IT6 56 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 LYZL4Q96KX0 146 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 FER1L6-AS2Q96M78 137 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 SCGB3A2Q96PL1 93 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 GPER1Q99527 375 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 OR10A2Q9H208 303 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 LRFN1Q9P244 771 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 ABI3Q9P2A4 366 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 V9GYS6 101 aa12.87□□□□□ -0.35
CDH1-213ENST00000612417 A0A1W2PP11 408 aa12.86□□□□□ -0.35
CDH1-213ENST00000612417 CDRT15L2A8MXV6 281 aa12.86□□□□□ -0.35
CDH1-213ENST00000612417 TEX46H3BTG2 121 aa12.86□□□□□ -0.35
CDH1-213ENST00000612417 EIF1BO60739 113 aaKnown RBP12.86□□□□□ -0.35
CDH1-213ENST00000612417 VAMP5O95183 116 aa12.86□□□□□ -0.35
CDH1-213ENST00000612417 CEACAM1P13688 526 aa12.86□□□□□ -0.35
CDH1-213ENST00000612417 PTGFRP43088 359 aa12.86□□□□□ -0.35
CDH1-213ENST00000612417 ENDOGQ14249 297 aaKnown RBP12.86□□□□□ -0.35
CDH1-213ENST00000612417 ATXN7L3Q14CW9 347 aaPredicted RBP12.86□□□□□ -0.35
CDH1-213ENST00000612417 KISS1Q15726 138 aa12.86□□□□□ -0.35
CDH1-213ENST00000612417 ATP1A1-AS1Q5TC04 95 aa12.86□□□□□ -0.35
CDH1-213ENST00000612417 SPINK14Q6IE38 97 aa12.86□□□□□ -0.35
CDH1-213ENST00000612417 SLC16A14Q7RTX9 510 aa12.86□□□□□ -0.35
CDH1-213ENST00000612417 CCDC54Q8NEL0 328 aa12.86□□□□□ -0.35
CDH1-213ENST00000612417 C10orf35Q96D05 121 aa12.86□□□□□ -0.35
CDH1-213ENST00000612417 PGAM5Q96HS1 289 aa12.86□□□□□ -0.35
CDH1-213ENST00000612417 RAB18Q9NP72 206 aa12.86□□□□□ -0.35
CDH1-213ENST00000612417 TEX13DA0A0J9YY54 714 aaPredicted RBP12.85□□□□□ -0.35
CDH1-213ENST00000612417 F8VVB4 439 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 F8VWA3 439 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 ZIC3O60481 467 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 DHRS3O75911 302 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 SFT2D2O95562 160 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 SERPINF1P36955 418 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 GUCA1AP43080 201 aaPredicted RBP12.85□□□□□ -0.35
CDH1-213ENST00000612417 PPIAP62937 165 aaKnown RBP12.85□□□□□ -0.35
CDH1-213ENST00000612417 LINC00696Q6ZRV3 163 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 DTX1Q86Y01 620 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 OR5H2Q8NGV7 314 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 PP6455Q8WZ26 134 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 NABP1Q96AH0 204 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 GVINP1Q7Z2Y8 2422 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 C5orf51A6NDU8 294 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 EEF1E1-BLOC1S5C9J1V9 151 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 NCKAP5O14513 1909 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 CA11O75493 328 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 TRAPPC6AO75865 159 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 TAS2R46P59540 309 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 NAAAQ02083 359 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 ZNF273Q14593 569 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 SGCAQ16586 387 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 GFOD2Q3B7J2 385 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 BEX5Q5H9J7 111 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 VASH2Q86V25 355 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 TMEM17Q86X19 198 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 TMEM123Q8N131 208 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 USB1Q9BQ65 265 aaKnown RBP12.85□□□□□ -0.35
CDH1-213ENST00000612417 TM2D1Q9BX74 207 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 CHST5Q9GZS9 411 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 ASCL3Q9NQ33 180 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 ZC4H2Q9NQZ6 224 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 ZNF175Q9Y473 711 aa12.85□□□□□ -0.35
CDH1-213ENST00000612417 C5orf63A6NC05 138 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 F5H0A9 414 aaPredicted RBP12.84□□□□□ -0.35
CDH1-213ENST00000612417 TOR1AO14656 332 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 LYL1P12980 280 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 AMY2BP19961 511 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 NPY4RP50391 375 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 SUCLG1P53597 346 aaKnown RBP12.84□□□□□ -0.35
CDH1-213ENST00000612417 ARFRP1Q13795 201 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 ARL6IP1Q15041 203 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 PHYHD1Q5SRE7 291 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 YRDCQ86U90 279 aaKnown RBP12.84□□□□□ -0.35
CDH1-213ENST00000612417 OR5AP2Q8NGF4 316 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 OR14L1PQ8NHC6 308 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 PIK3IP1Q96FE7 263 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 MS4A7Q9GZW8 240 aaPredicted RBP12.84□□□□□ -0.35
CDH1-213ENST00000612417 PIGMQ9H3S5 423 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 PLA2G3Q9NZ20 509 aa12.84□□□□□ -0.35
CDH1-213ENST00000612417 FOXD3Q9UJU5 478 aaPredicted RBP12.84□□□□□ -0.35
CDH1-213ENST00000612417 OSGIN2Q9Y236 505 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms