RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 SOX6P35712 828 aa18.28■□□□□ 0.52
CBWD3-207ENST00000611426 RPS19P39019 145 aaKnown RBP18.28■□□□□ 0.52
CBWD3-207ENST00000611426 MMP16P51512 607 aa18.28■□□□□ 0.52
CBWD3-207ENST00000611426 BTG1P62324 171 aa18.28■□□□□ 0.52
CBWD3-207ENST00000611426 OR10S1Q8NGN2 331 aa18.28■□□□□ 0.52
CBWD3-207ENST00000611426 THRSPQ92748 146 aa18.28■□□□□ 0.52
CBWD3-207ENST00000611426 APOBEC3DQ96AK3 386 aaPredicted RBP18.28■□□□□ 0.52
CBWD3-207ENST00000611426 HDHD2Q9H0R4 259 aa18.28■□□□□ 0.52
CBWD3-207ENST00000611426 PATZ1Q9HBE1 687 aaKnown RBP18.28■□□□□ 0.52
CBWD3-207ENST00000611426 FRRS1LQ9P0K9 344 aa18.28■□□□□ 0.52
CBWD3-207ENST00000611426 TRBV5-5A0A0J9YX44 114 aa18.27■□□□□ 0.51
CBWD3-207ENST00000611426 PSMD9O00233 223 aa18.27■□□□□ 0.51
CBWD3-207ENST00000611426 UCHL1P09936 223 aa18.27■□□□□ 0.51
CBWD3-207ENST00000611426 FPR2P25090 351 aa18.27■□□□□ 0.51
CBWD3-207ENST00000611426 CFPP27918 469 aa18.27■□□□□ 0.51
CBWD3-207ENST00000611426 ZMYND11Q15326 602 aa18.27■□□□□ 0.51
CBWD3-207ENST00000611426 ACSM3Q53FZ2 586 aa18.27■□□□□ 0.51
CBWD3-207ENST00000611426 OR2T2Q6IF00 324 aa18.27■□□□□ 0.51
CBWD3-207ENST00000611426 CORO6Q6QEF8 472 aa18.27■□□□□ 0.51
CBWD3-207ENST00000611426 FBXW12Q6X9E4 464 aa18.27■□□□□ 0.51
CBWD3-207ENST00000611426 TPRA1Q86W33 373 aa18.27■□□□□ 0.51
CBWD3-207ENST00000611426 LINC00346Q8IVM7 164 aa18.27■□□□□ 0.51
CBWD3-207ENST00000611426 OR2AJ1Q8NGZ0 328 aa18.27■□□□□ 0.51
CBWD3-207ENST00000611426 GCDHQ92947 438 aaPredicted RBP18.27■□□□□ 0.51
CBWD3-207ENST00000611426 SLAMF6Q96DU3 332 aa18.27■□□□□ 0.51
CBWD3-207ENST00000611426 PNRC2Q9NPJ4 139 aaKnown RBP18.27■□□□□ 0.51
CBWD3-207ENST00000611426 MMP26Q9NRE1 261 aa18.27■□□□□ 0.51
CBWD3-207ENST00000611426 DDX28Q9NUL7 540 aaKnown RBP18.27■□□□□ 0.51
CBWD3-207ENST00000611426 R4GMQ9 66 aa18.27■□□□□ 0.51
CBWD3-207ENST00000611426 TRAV1-2A0A0B4J238 106 aa18.26■□□□□ 0.51
CBWD3-207ENST00000611426 ZNF878C9JN71 531 aa18.26■□□□□ 0.51
CBWD3-207ENST00000611426 SDC2P34741 201 aa18.26■□□□□ 0.51
CBWD3-207ENST00000611426 KIR3DL2P43630 455 aa18.26■□□□□ 0.51
CBWD3-207ENST00000611426 SLC6A9P48067 706 aa18.26■□□□□ 0.51
CBWD3-207ENST00000611426 RORCP51449 518 aa18.26■□□□□ 0.51
CBWD3-207ENST00000611426 CATSPERDQ86XM0 798 aa18.26■□□□□ 0.51
CBWD3-207ENST00000611426 OR8G5Q8NG78 346 aa18.26■□□□□ 0.51
CBWD3-207ENST00000611426 OR6Q1Q8NGQ2 317 aa18.26■□□□□ 0.51
CBWD3-207ENST00000611426 OR13G1Q8NGZ3 307 aa18.26■□□□□ 0.51
CBWD3-207ENST00000611426 OR5AK2Q8NH90 309 aa18.26■□□□□ 0.51
CBWD3-207ENST00000611426 MCFD2Q8NI22 146 aa18.26■□□□□ 0.51
CBWD3-207ENST00000611426 C22orf15Q8WYQ4 148 aa18.26■□□□□ 0.51
CBWD3-207ENST00000611426 RGP1Q92546 391 aaPredicted RBP18.26■□□□□ 0.51
CBWD3-207ENST00000611426 PDCD1LG2Q9BQ51 273 aa18.26■□□□□ 0.51
CBWD3-207ENST00000611426 GCM1Q9NP62 436 aa18.26■□□□□ 0.51
CBWD3-207ENST00000611426 TMEM178BH3BS89 294 aa18.25■□□□□ 0.51
CBWD3-207ENST00000611426 ARL6IP5O75915 188 aa18.25■□□□□ 0.51
CBWD3-207ENST00000611426 RPP14O95059 124 aaKnown RBP18.25■□□□□ 0.51
CBWD3-207ENST00000611426 CDRT1O95170 752 aa18.25■□□□□ 0.51
CBWD3-207ENST00000611426 ZNF829Q3KNS6 432 aaPredicted RBP18.25■□□□□ 0.51
CBWD3-207ENST00000611426 WDR38Q5JTN6 314 aa18.25■□□□□ 0.51
CBWD3-207ENST00000611426 CFAP77Q6ZQR2 320 aa18.25■□□□□ 0.51
CBWD3-207ENST00000611426 CEACAM19Q7Z692 300 aa18.25■□□□□ 0.51
CBWD3-207ENST00000611426 PRSS35Q8N3Z0 413 aa18.25■□□□□ 0.51
CBWD3-207ENST00000611426 OR10AD1Q8NGE0 317 aa18.25■□□□□ 0.51
CBWD3-207ENST00000611426 BARHL1Q9BZE3 327 aa18.25■□□□□ 0.51
CBWD3-207ENST00000611426 COMMD4Q9H0A8 199 aa18.25■□□□□ 0.51
CBWD3-207ENST00000611426 TMEM89A2RUT3 159 aa18.24■□□□□ 0.51
CBWD3-207ENST00000611426 TRAPPC2LH3BP13 241 aa18.24■□□□□ 0.51
CBWD3-207ENST00000611426 IFNL4K9M1U5 179 aa18.24■□□□□ 0.51
CBWD3-207ENST00000611426 FSHBP01225 129 aa18.24■□□□□ 0.51
CBWD3-207ENST00000611426 H2BFMP0C1H6 154 aa18.24■□□□□ 0.51
CBWD3-207ENST00000611426 CFL1P23528 166 aaKnown RBP18.24■□□□□ 0.51
CBWD3-207ENST00000611426 MAPK3P27361 379 aaPredicted RBP18.24■□□□□ 0.51
CBWD3-207ENST00000611426 MDH2P40926 338 aaKnown RBP18.24■□□□□ 0.51
CBWD3-207ENST00000611426 COMPP49747 757 aaPredicted RBP18.24■□□□□ 0.51
CBWD3-207ENST00000611426 SEC61A1P61619 476 aaKnown RBP18.24■□□□□ 0.51
CBWD3-207ENST00000611426 MUC20Q8N307 709 aaPredicted RBP18.24■□□□□ 0.51
CBWD3-207ENST00000611426 DEFB108BQ8NET1 73 aa18.24■□□□□ 0.51
CBWD3-207ENST00000611426 MEGF10Q96KG7 1140 aa18.24■□□□□ 0.51
CBWD3-207ENST00000611426 MOB1AQ9H8S9 216 aa18.24■□□□□ 0.51
CBWD3-207ENST00000611426 POLR3KQ9Y2Y1 108 aaPredicted RBP18.24■□□□□ 0.51
CBWD3-207ENST00000611426 SHISA3A0PJX4 238 aa18.23■□□□□ 0.51
CBWD3-207ENST00000611426 ZNF879B4DU55 563 aa18.23■□□□□ 0.51
CBWD3-207ENST00000611426 ISG15P05161 165 aa18.23■□□□□ 0.51
CBWD3-207ENST00000611426 SRP9P49458 86 aaKnown RBP18.23■□□□□ 0.51
CBWD3-207ENST00000611426 PSMA6P60900 246 aaKnown RBP18.23■□□□□ 0.51
CBWD3-207ENST00000611426 GRB2P62993 217 aaKnown RBP18.23■□□□□ 0.51
CBWD3-207ENST00000611426 ZNF154Q13106 437 aa18.23■□□□□ 0.51
CBWD3-207ENST00000611426 INSL4Q14641 139 aa18.23■□□□□ 0.51
CBWD3-207ENST00000611426 RSPO1Q2MKA7 263 aaPredicted RBP18.23■□□□□ 0.51
CBWD3-207ENST00000611426 Q499Y3 187 aa18.23■□□□□ 0.51
CBWD3-207ENST00000611426 ESCO2Q56NI9 601 aa18.23■□□□□ 0.51
CBWD3-207ENST00000611426 C3orf56Q8N813 242 aa18.23■□□□□ 0.51
CBWD3-207ENST00000611426 BHLHE23Q8NDY6 225 aa18.23■□□□□ 0.51
CBWD3-207ENST00000611426 PPIL3Q9H2H8 161 aaKnown RBP18.23■□□□□ 0.51
CBWD3-207ENST00000611426 FAM206AQ9NX38 181 aa18.23■□□□□ 0.51
CBWD3-207ENST00000611426 AUP1Q9Y679 476 aa18.23■□□□□ 0.51
CBWD3-207ENST00000611426 TRBV5-7A0A0A0MS05 114 aa18.22■□□□□ 0.51
CBWD3-207ENST00000611426 ANKRD61A6NGH8 418 aa18.22■□□□□ 0.51
CBWD3-207ENST00000611426 ACOD1A6NK06 481 aa18.22■□□□□ 0.51
CBWD3-207ENST00000611426 F5H0A9 414 aaPredicted RBP18.22■□□□□ 0.51
CBWD3-207ENST00000611426 F5H5K5 113 aa18.22■□□□□ 0.51
CBWD3-207ENST00000611426 H0YL77 283 aa18.22■□□□□ 0.51
CBWD3-207ENST00000611426 ZNF12P17014 697 aa18.22■□□□□ 0.51
CBWD3-207ENST00000611426 OTX1P32242 354 aaPredicted RBP18.22■□□□□ 0.51
CBWD3-207ENST00000611426 MFGE8Q08431 387 aaPredicted RBP18.22■□□□□ 0.51
CBWD3-207ENST00000611426 CROCCP3Q8IVE0 287 aa18.22■□□□□ 0.51
CBWD3-207ENST00000611426 OR13C5Q8NGS8 318 aa18.22■□□□□ 0.51
CBWD3-207ENST00000611426 GPR148Q8TDV2 347 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms