RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 GCSAMQ8N6F7 178 aa11.65□□□□□ -0.54
RNF40-212ENST00000602784 ZNF671Q8TAW3 534 aa11.65□□□□□ -0.54
RNF40-212ENST00000602784 TSEN15Q8WW01 171 aaKnown RBP11.65□□□□□ -0.54
RNF40-212ENST00000602784 AQP3Q92482 292 aa11.65□□□□□ -0.54
RNF40-212ENST00000602784 RPL3LQ92901 407 aaKnown RBP11.65□□□□□ -0.54
RNF40-212ENST00000602784 SPSB1Q96BD6 273 aa11.65□□□□□ -0.54
RNF40-212ENST00000602784 RAB39BQ96DA2 213 aa11.65□□□□□ -0.54
RNF40-212ENST00000602784 ZCCHC4Q9H5U6 513 aa11.65□□□□□ -0.54
RNF40-212ENST00000602784 TMEM165Q9HC07 324 aa11.65□□□□□ -0.54
RNF40-212ENST00000602784 NEK6Q9HC98 313 aa11.65□□□□□ -0.54
RNF40-212ENST00000602784 YLPM1P49750 1951 aaKnown RBP11.65□□□□□ -0.55
RNF40-212ENST00000602784 ABCA1O95477 2261 aa11.65□□□□□ -0.55
RNF40-212ENST00000602784 IGKV1-9A0A0C4DH69 117 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 TRBV5-5A0A0J9YX44 114 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 hCG_1807616A0A1W2PRN6 198 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 ISPDA4D126 451 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 SRRM5B3KS81 715 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 J3QT63 122 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 LGALS8O00214 317 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 IGHV2-5P01817 119 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 OCM2P0CE71 109 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 ATF1P18846 271 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 MPZP25189 248 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 RPS11P62280 158 aaKnown RBP eCLIP11.64□□□□□ -0.55
RNF40-212ENST00000602784 HNRNPA0Q13151 305 aaKnown RBP11.64□□□□□ -0.55
RNF40-212ENST00000602784 TPBGQ13641 420 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 DOC2BQ14184 412 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 ZNF404Q494X3 552 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 Q499Y3 187 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 DMRTC1Q5HYR2 192 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 ZNF529Q6P280 563 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 MS4A15Q8N5U1 240 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 ZFP41Q8N8Y5 198 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 LRRC29Q8WV35 223 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 THRSPQ92748 146 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 TMEM106AQ96A25 262 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 GAL3ST1Q99999 423 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 PKIBQ9C010 78 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 ZNF665Q9H7R5 613 aa11.64□□□□□ -0.55
RNF40-212ENST00000602784 TRAV38-1A0A0B4J264 116 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 NDUFA2O43678 99 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 NOS1APO75052 506 aaPredicted RBP11.63□□□□□ -0.55
RNF40-212ENST00000602784 IGHV4-31P0DP07 118 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 MUC1P15941 1255 aaPredicted RBP11.63□□□□□ -0.55
RNF40-212ENST00000602784 RBMXP38159 391 aaKnown RBP11.63□□□□□ -0.55
RNF40-212ENST00000602784 HAAOP46952 286 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 RBP2P50120 134 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 ATP1B3P54709 279 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 KRTAP1-1Q07627 177 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 MLLT11Q13015 90 aaPredicted RBP11.63□□□□□ -0.55
RNF40-212ENST00000602784 KCTD21Q4G0X4 260 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 FAM201AQ5SY85 155 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 TEX36Q5VZQ5 186 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 CYB5R2Q6BCY4 276 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 HAGHLQ6PII5 290 aaPredicted RBP11.63□□□□□ -0.55
RNF40-212ENST00000602784 SVOPQ8N4V2 548 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 C12orf43Q96C57 262 aaKnown RBP11.63□□□□□ -0.55
RNF40-212ENST00000602784 BORCS8Q96FH0 119 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 TMEM246Q9BRR3 403 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 NARFLQ9H6Q4 476 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 METTL17Q9H7H0 456 aaPredicted RBP11.63□□□□□ -0.55
RNF40-212ENST00000602784 PATZ1Q9HBE1 687 aaKnown RBP11.63□□□□□ -0.55
RNF40-212ENST00000602784 ACOT13Q9NPJ3 140 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 RASL12Q9NYN1 266 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 MIOXQ9UGB7 285 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 PCDHB10Q9UN67 800 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 POLDIP2Q9Y2S7 368 aa11.63□□□□□ -0.55
RNF40-212ENST00000602784 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.62□□□□□ -0.55
RNF40-212ENST00000602784 FAM230AA0A1W2PPH8 454 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 OOEPA6NGQ2 149 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 B4DSR2 109 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.62□□□□□ -0.55
RNF40-212ENST00000602784 TNFRSF13BO14836 293 aaPredicted RBP11.62□□□□□ -0.55
RNF40-212ENST00000602784 SULT1B1O43704 296 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 CD5LO43866 347 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 GPX5O75715 221 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 LY6G6DO95868 133 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 AZGP1P25311 298 aaKnown RBP11.62□□□□□ -0.55
RNF40-212ENST00000602784 IL2RGP31785 369 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 MAP2K4P45985 399 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 SOX2P48431 317 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 MTCP1P56278 107 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 EMX1Q04741 257 aaPredicted RBP11.62□□□□□ -0.55
RNF40-212ENST00000602784 IL24Q13007 206 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 MICBQ29980 383 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 CLEC9AQ6UXN8 241 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 DCDC5Q6ZRR9 648 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 LHFPL2Q6ZUX7 228 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 ZNF367Q7RTV3 350 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 SPARTQ8N0X7 666 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 OR13C9Q8NGT0 318 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 TRMT10AQ8TBZ6 339 aaKnown RBP11.62□□□□□ -0.55
RNF40-212ENST00000602784 OPALINQ96PE5 141 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 MGLLQ99685 303 aa11.62□□□□□ -0.55
RNF40-212ENST00000602784 IGKV1-27A0A075B6S5 117 aa11.61□□□□□ -0.55
RNF40-212ENST00000602784 TRBV5-7A0A0A0MS05 114 aa11.61□□□□□ -0.55
RNF40-212ENST00000602784 PNMA8CA0A1B0GUJ8 204 aa11.61□□□□□ -0.55
RNF40-212ENST00000602784 CEACAM18A8MTB9 384 aa11.61□□□□□ -0.55
RNF40-212ENST00000602784 ZNF879B4DU55 563 aa11.61□□□□□ -0.55
RNF40-212ENST00000602784 F5H0A9 414 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms