RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 NLKQ9UBE8 527 aa8.69□□□□□ -1.02
CCDC9-203ENST00000596938 DNAJB11Q9UBS4 358 aa8.69□□□□□ -1.02
CCDC9-203ENST00000596938 SOX21Q9Y651 276 aaPredicted RBP8.69□□□□□ -1.02
CCDC9-203ENST00000596938 A0A1B0GW55 424 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 OR2AT4A6NND4 320 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 SIGLEC5O15389 551 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 NOS1APO75052 506 aaPredicted RBP8.68□□□□□ -1.02
CCDC9-203ENST00000596938 RHBDL1O75783 438 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 DUX4L2P0CJ85 424 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 DUX4L3P0CJ86 424 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 DUX4L4P0CJ87 422 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 DUX4L5P0CJ88 424 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 DUX4L6P0CJ89 424 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 DUX4L7P0CJ90 424 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 CCL1P22362 96 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 GLRA1P23415 457 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 ATP6V1E1P36543 226 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 ALDH3A2P51648 485 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 CAV3P56539 151 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 SNRPGP62308 76 aaKnown RBP8.68□□□□□ -1.02
CCDC9-203ENST00000596938 IL13RA1P78552 427 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 FOXL1Q12952 345 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 OCLNQ16625 522 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 DEFB112Q30KQ8 113 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 MEDAGQ5VYS4 303 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 PLCXD3Q63HM9 321 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 HAGHLQ6PII5 290 aaPredicted RBP8.68□□□□□ -1.02
CCDC9-203ENST00000596938 DUX4L9Q6RFH8 374 aaPredicted RBP8.68□□□□□ -1.02
CCDC9-203ENST00000596938 BRD3OSQ6XYD6 125 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 Q6YL49 198 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 PLEKHG7Q6ZR37 379 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 KCTD20Q7Z5Y7 419 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 CATSPERDQ86XM0 798 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 ZNF573Q86YE8 665 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 KIR3DL3Q8N743 410 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 FAM216BQ8N7L0 139 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 C3orf56Q8N813 242 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 YIPF7Q8N8F6 280 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 CCDC54Q8NEL0 328 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 GATAD2BQ8WXI9 593 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 RORBQ92753 470 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 UBE2FQ969M7 185 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 TMIGD2Q96BF3 282 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 GAFA1Q96PS6 74 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 DUX5Q96PT3 197 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 DCTN5Q9BTE1 182 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 SNTG1Q9NSN8 517 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 DUX4Q9UBX2 424 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.68□□□□□ -1.02
CCDC9-203ENST00000596938 GTF2A1LQ9UNN4 478 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 SLC22A13Q9Y226 551 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 ORC6Q9Y5N6 252 aa8.68□□□□□ -1.02
CCDC9-203ENST00000596938 IGKV1D-17A0A075B6S4 117 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 IGHV1-69DA0A0B4J2H0 117 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 A0A1B0GVI7 797 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 PQLC2LA1A4F0 135 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 NKX6-3A6NJ46 265 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 EBAG9O00559 213 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 EI24O14681 340 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 RPP14O95059 124 aaKnown RBP8.67□□□□□ -1.02
CCDC9-203ENST00000596938 IGHV1-69P01742 117 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 PSG2P11465 335 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 GMFBP60983 142 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 ISL1P61371 349 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 IKZF1Q13422 519 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 DGUOKQ16854 277 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 AWAT1Q58HT5 328 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 DMRTC1Q5HYR2 192 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 C16orf87Q6PH81 154 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 METAP1DQ6UB28 335 aaPredicted RBP8.67□□□□□ -1.02
CCDC9-203ENST00000596938 CMTM4Q8IZR5 234 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 FGFRL1Q8N441 504 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 TMEM86BQ8N661 226 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 POC1AQ8NBT0 407 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 OR10H4Q8NGA5 316 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 NPRL2Q8WTW4 380 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 ZDHHC16Q969W1 377 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 SDSLQ96GA7 329 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 TBX5Q99593 518 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 ACOXLQ9NUZ1 547 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 IMPAD1Q9NX62 359 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 SLC25A10Q9UBX3 287 aaPredicted RBP8.67□□□□□ -1.02
CCDC9-203ENST00000596938 ZNF222Q9UK12 451 aa8.67□□□□□ -1.02
CCDC9-203ENST00000596938 NBEAL1Q6ZS30 2694 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 SNTNA6NMZ2 147 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 J3QRE1 110 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 J3QT63 122 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 HOXA3O43365 443 aaPredicted RBP8.66□□□□□ -1.02
CCDC9-203ENST00000596938 ENTPD6O75354 484 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 APOL3O95236 402 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 PGA5P0DJD9 388 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 MPZP25189 248 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 HAAOP46952 286 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 GABRA2P47869 451 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 ZNF85Q03923 595 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 RUSC1-AS1Q66K80 236 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 EGFL6Q8IUX8 553 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 CBR4Q8N4T8 237 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 LHX4Q969G2 390 aa8.66□□□□□ -1.02
CCDC9-203ENST00000596938 C10orf35Q96D05 121 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms