RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 RTTNQ86VV8 2226 aa14.46□□□□□ -0.09
LIG1-206ENST00000594067 WDR87Q6ZQQ6 2873 aa14.46□□□□□ -0.09
LIG1-206ENST00000594067 SFTPBP07988 381 aa14.46□□□□□ -0.09
LIG1-206ENST00000594067 FCGR2AP12318 317 aa14.46□□□□□ -0.09
LIG1-206ENST00000594067 PRF1P14222 555 aa14.46□□□□□ -0.09
LIG1-206ENST00000594067 RPS2P15880 293 aaKnown RBP14.46□□□□□ -0.09
LIG1-206ENST00000594067 CD80P33681 288 aa14.46□□□□□ -0.09
LIG1-206ENST00000594067 SULT1A2P50226 295 aa14.46□□□□□ -0.09
LIG1-206ENST00000594067 F2RL1P55085 397 aa14.46□□□□□ -0.09
LIG1-206ENST00000594067 FAM189A2Q15884 450 aa14.46□□□□□ -0.09
LIG1-206ENST00000594067 NANPQ8TBE9 248 aa14.46□□□□□ -0.09
LIG1-206ENST00000594067 SMCO4Q9NRQ5 59 aa14.46□□□□□ -0.09
LIG1-206ENST00000594067 EDARQ9UNE0 448 aa14.46□□□□□ -0.09
LIG1-206ENST00000594067 HDGFL3Q9Y3E1 203 aa14.46□□□□□ -0.09
LIG1-206ENST00000594067 IGKV1D-8A0A087WSZ0 117 aa14.46□□□□□ -0.1
LIG1-206ENST00000594067 A0A1W2PQM1 296 aa14.46□□□□□ -0.1
LIG1-206ENST00000594067 FOXI3A8MTJ6 420 aaPredicted RBP14.46□□□□□ -0.1
LIG1-206ENST00000594067 TLX3O43711 291 aaPredicted RBP14.46□□□□□ -0.1
LIG1-206ENST00000594067 FBXO24O75426 580 aa14.46□□□□□ -0.1
LIG1-206ENST00000594067 CELA2AP08217 269 aa14.46□□□□□ -0.1
LIG1-206ENST00000594067 GUCA1AP43080 201 aaPredicted RBP14.46□□□□□ -0.1
LIG1-206ENST00000594067 ID4P47928 161 aa14.46□□□□□ -0.1
LIG1-206ENST00000594067 TAS2R46P59540 309 aa14.46□□□□□ -0.1
LIG1-206ENST00000594067 RAB5BP61020 215 aa14.46□□□□□ -0.1
LIG1-206ENST00000594067 CHRFAM7AQ494W8 412 aa14.46□□□□□ -0.1
LIG1-206ENST00000594067 DNASE2BQ8WZ79 361 aa14.46□□□□□ -0.1
LIG1-206ENST00000594067 C5orf52A6NGY3 159 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 HKR1P10072 659 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 PAX6P26367 422 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 CSNK1A1P48729 337 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 SLC35A1P78382 337 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 CCL7P80098 99 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 ZNF385CQ66K41 422 aaPredicted RBP14.45□□□□□ -0.1
LIG1-206ENST00000594067 EIF5AL1Q6IS14 154 aaKnown RBP14.45□□□□□ -0.1
LIG1-206ENST00000594067 SLC25A43Q8WUT9 341 aaPredicted RBP14.45□□□□□ -0.1
LIG1-206ENST00000594067 CLCC1Q96S66 551 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 SULT4A1Q9BR01 284 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 PMS2P1A4D2B8 440 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 TAAR5O14804 337 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 TOX3O15405 576 aaPredicted RBP14.45□□□□□ -0.1
LIG1-206ENST00000594067 DBHP09172 617 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 MSR1P21757 451 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 PTGER4P35408 488 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 EIF5AP63241 154 aaKnown RBP14.45□□□□□ -0.1
LIG1-206ENST00000594067 HGFACQ04756 655 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 SPEM2Q0P670 501 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 FAM76BQ5HYJ3 339 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 C15orf54Q8N8G6 183 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 FADS6Q8N9I5 356 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 C14orf79Q96F83 325 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 ZNF385AQ96PM9 386 aaKnown RBP14.45□□□□□ -0.1
LIG1-206ENST00000594067 S100A13Q99584 98 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 CACFD1Q9UGQ2 172 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 ARID1AO14497 2285 aa14.45□□□□□ -0.1
LIG1-206ENST00000594067 LINC00587B1AMM8 73 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 DKK1O94907 266 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 PET100P0DJ07 73 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 NAT2P11245 290 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 ZNF44P15621 663 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 GABRR1P24046 479 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 PTAFRP25105 342 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 THBS4P35443 961 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 TMEM268Q5VZI3 342 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 RBMS3Q6XE24 437 aaKnown RBP14.44□□□□□ -0.1
LIG1-206ENST00000594067 C6orf201Q7Z4U5 140 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 KIRREL1Q96J84 757 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 NECAB3Q96P71 396 aaPredicted RBP14.44□□□□□ -0.1
LIG1-206ENST00000594067 HDHD3Q9BSH5 251 aaPredicted RBP14.44□□□□□ -0.1
LIG1-206ENST00000594067 PIGLQ9Y2B2 252 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 TIMM10BQ9Y5J6 103 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 CHCHD2Q9Y6H1 151 aaPredicted RBP14.44□□□□□ -0.1
LIG1-206ENST00000594067 IGHV5-10-1A0A0J9YXX1 117 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 IGLV3-1P01715 115 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 ENDOGQ14249 297 aaKnown RBP14.44□□□□□ -0.1
LIG1-206ENST00000594067 OR2A2Q6IF42 318 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 GJC3Q8NFK1 279 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 EMG1Q92979 244 aaKnown RBP14.44□□□□□ -0.1
LIG1-206ENST00000594067 HIST1H2BAQ96A08 127 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 AKR1E2Q96JD6 320 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 PARP11Q9NR21 331 aa14.44□□□□□ -0.1
LIG1-206ENST00000594067 MCTS1Q9ULC4 181 aaKnown RBP14.44□□□□□ -0.1
LIG1-206ENST00000594067 MRPS17Q9Y2R5 130 aaKnown RBP14.44□□□□□ -0.1
LIG1-206ENST00000594067 DHRS3O75911 302 aa14.43□□□□□ -0.1
LIG1-206ENST00000594067 CTSSP25774 331 aa14.43□□□□□ -0.1
LIG1-206ENST00000594067 EIF1P41567 113 aaKnown RBP14.43□□□□□ -0.1
LIG1-206ENST00000594067 AKR1C3P42330 323 aa14.43□□□□□ -0.1
LIG1-206ENST00000594067 DVL1P1P54792 670 aaPredicted RBP14.43□□□□□ -0.1
LIG1-206ENST00000594067 LSM6P62312 80 aaKnown RBP14.43□□□□□ -0.1
LIG1-206ENST00000594067 ZNF239Q16600 458 aaKnown RBP14.43□□□□□ -0.1
LIG1-206ENST00000594067 RSPO1Q2MKA7 263 aaPredicted RBP14.43□□□□□ -0.1
LIG1-206ENST00000594067 AKIRIN2Q53H80 203 aa14.43□□□□□ -0.1
LIG1-206ENST00000594067 SLC16A13Q7RTY0 426 aa14.43□□□□□ -0.1
LIG1-206ENST00000594067 RBM24Q9BX46 236 aaKnown RBP14.43□□□□□ -0.1
LIG1-206ENST00000594067 NELFAQ9H3P2 528 aa14.43□□□□□ -0.1
LIG1-206ENST00000594067 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.43□□□□□ -0.1
LIG1-206ENST00000594067 GHRLQ9UBU3 117 aa14.43□□□□□ -0.1
LIG1-206ENST00000594067 C19orf25Q9UFG5 118 aaPredicted RBP14.43□□□□□ -0.1
LIG1-206ENST00000594067 C14orf166Q9Y224 244 aaKnown RBP14.43□□□□□ -0.1
LIG1-206ENST00000594067 V9GYS6 101 aa14.43□□□□□ -0.1
LIG1-206ENST00000594067 GDF9O60383 454 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms