RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 SPICQ8N5J4 248 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 PARP16Q8N5Y8 322 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 GCSAMQ8N6F7 178 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 OR5D14Q8NGL3 314 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 OR13C5Q8NGS8 318 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 OR13C9Q8NGT0 318 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 BORCS8Q96FH0 119 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 ZCCHC4Q9H5U6 513 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 METTL17Q9H7H0 456 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-221ENST00000593026 PPIAL4AQ9Y536 164 aa12.54□□□□□ -0.4
DDX39A-221ENST00000593026 J3QT63 122 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 FSTL3O95633 263 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 HSMCR30P0CW71 290 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 ATF1P18846 271 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 PRKACBP22694 351 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 AZGP1P25311 298 aaKnown RBP12.53□□□□□ -0.4
DDX39A-221ENST00000593026 IL2RGP31785 369 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 HAAOP46952 286 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 LMO4P61968 165 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 HOXA4Q00056 320 aaPredicted RBP12.53□□□□□ -0.4
DDX39A-221ENST00000593026 BIVMQ86UB2 503 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 SVOPQ8N4V2 548 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 C19orf18Q8NEA5 215 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 DNAAF1Q8NEP3 725 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 OR10Z1Q8NGY1 313 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 AQP3Q92482 292 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 TMEM106AQ96A25 262 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 SPSB1Q96BD6 273 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 RAB39BQ96DA2 213 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 SMR3AQ99954 134 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 ZNF665Q9H7R5 613 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 TMEM165Q9HC07 324 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 NEK6Q9HC98 313 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 PCDHB10Q9UN67 800 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 LRRC42Q9Y546 428 aa12.53□□□□□ -0.4
DDX39A-221ENST00000593026 TEP1Q99973 2627 aaKnown RBP12.53□□□□□ -0.4
DDX39A-221ENST00000593026 ACANP16112 2415 aa12.52□□□□□ -0.4
DDX39A-221ENST00000593026 IGKV1-9A0A0C4DH69 117 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 TRBV5-5A0A0J9YX44 114 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 SRRM5B3KS81 715 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 C3orf80F5H4A9 247 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 LGALS8O00214 317 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 SULT1B1O43704 296 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 RHBDL1O75783 438 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 LHBP01229 141 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 IGHV2-5P01817 119 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 IGHV4-31P0DP07 118 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 EGR1P18146 543 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 GZMKP49863 264 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 RBP2P50120 134 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 RPS11P62280 158 aaKnown RBP eCLIP12.52□□□□□ -0.41
DDX39A-221ENST00000593026 MLLT11Q13015 90 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-221ENST00000593026 ZNF404Q494X3 552 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 Q499Y3 187 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 SFRP4Q6FHJ7 346 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-221ENST00000593026 ZNF367Q7RTV3 350 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 DEFB108BQ8NET1 73 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 ZNF671Q8TAW3 534 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 UFD1Q92890 307 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 OPALINQ96PE5 141 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 ISYNA1Q9NPH2 558 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 ACOT13Q9NPJ3 140 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 POLDIP2Q9Y2S7 368 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 MED13LQ71F56 2210 aa12.52□□□□□ -0.41
DDX39A-221ENST00000593026 IGKV1-27A0A075B6S5 117 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 TRAV38-1A0A0B4J264 116 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 OOEPA6NGQ2 149 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 AKR7A2O43488 359 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 RAB3AP20336 220 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 ATP1B3P54709 279 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 MTCP1P56278 107 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 GMFBP60983 142 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 EMX1Q04741 257 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-221ENST00000593026 GPR50Q13585 617 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 KCNJ8Q15842 424 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 KCTD21Q4G0X4 260 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 LIPKQ5VXJ0 399 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 CLEC9AQ6UXN8 241 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 LHFPL2Q6ZUX7 228 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 ANGPTL5Q86XS5 388 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 THRSPQ92748 146 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 OR14A2Q96R54 314 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 MGLLQ99685 303 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 TMEM246Q9BRR3 403 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 TAS2R4Q9NYW5 299 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 DNAJB11Q9UBS4 358 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 LRCH1Q9Y2L9 728 aa12.51□□□□□ -0.41
DDX39A-221ENST00000593026 CEACAM18A8MTB9 384 aa12.5□□□□□ -0.41
DDX39A-221ENST00000593026 SYNGR1O43759 233 aa12.5□□□□□ -0.41
DDX39A-221ENST00000593026 ALX3O95076 343 aa12.5□□□□□ -0.41
DDX39A-221ENST00000593026 LY6G6DO95868 133 aa12.5□□□□□ -0.41
DDX39A-221ENST00000593026 PLATP00750 562 aa12.5□□□□□ -0.41
DDX39A-221ENST00000593026 HCKP08631 526 aa12.5□□□□□ -0.41
DDX39A-221ENST00000593026 RPS2P15880 293 aaKnown RBP12.5□□□□□ -0.41
DDX39A-221ENST00000593026 MUC1P15941 1255 aaPredicted RBP12.5□□□□□ -0.41
DDX39A-221ENST00000593026 MPZP25189 248 aa12.5□□□□□ -0.41
DDX39A-221ENST00000593026 MAPK3P27361 379 aaPredicted RBP12.5□□□□□ -0.41
DDX39A-221ENST00000593026 PPP3R1P63098 170 aa12.5□□□□□ -0.41
DDX39A-221ENST00000593026 KRTAP1-1Q07627 177 aa12.5□□□□□ -0.41
DDX39A-221ENST00000593026 IL24Q13007 206 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms