RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 CRYBG3Q68DQ2 2970 aa12.84□□□□□ -0.35
ATG4D-211ENST00000589753 FBN2P35556 2912 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 IGHV1-69-2A0A0G2JMI3 117 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 SHISA3A0PJX4 238 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 TRIM64BA6NI03 449 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 CDIPTO14735 213 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 CDC14BO60729 498 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 IGHV4-39P01824 125 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 DAOP14920 347 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 ZNF93P35789 620 aaPredicted RBP12.83□□□□□ -0.36
ATG4D-211ENST00000589753 PTH2RP49190 550 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 TMBIM6P55061 237 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 ATP5J2P56134 94 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 CTF1Q16619 201 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 GLT8D1Q68CQ7 371 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 RNF144BQ7Z419 303 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 TPRA1Q86W33 373 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 ANGPTL5Q86XS5 388 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 CALHM1Q8IU99 346 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 CDH26Q8IXH8 852 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 C11orf53Q8IXP5 236 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 JAGN1Q8N5M9 183 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 ZNF420Q8TAQ5 688 aaPredicted RBP12.83□□□□□ -0.36
ATG4D-211ENST00000589753 Q8TCH9 128 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 RAB2BQ8WUD1 216 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 RDH5Q92781 318 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 RFT1Q96AA3 541 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 GSX2Q9BZM3 304 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 PKIBQ9C010 78 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 METTL17Q9H7H0 456 aaPredicted RBP12.83□□□□□ -0.36
ATG4D-211ENST00000589753 BARX1Q9HBU1 254 aaPredicted RBP12.83□□□□□ -0.36
ATG4D-211ENST00000589753 C1orf123Q9NWV4 160 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 TREM2Q9NZC2 230 aa12.83□□□□□ -0.36
ATG4D-211ENST00000589753 AK6Q9Y3D8 172 aaKnown RBP12.83□□□□□ -0.36
ATG4D-211ENST00000589753 LRBAP50851 2863 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 hCG_1807616A0A1W2PRN6 198 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 J3QT63 122 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 NOL3O60936 208 aaKnown RBP12.82□□□□□ -0.36
ATG4D-211ENST00000589753 LY6HO94772 140 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 PLATP00750 562 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 RAB3BP20337 219 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 SDC2P34741 201 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 TGFBR1P36897 503 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 PMELP40967 661 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 POU3F4P49335 361 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 PSMD7P51665 324 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 VBP1P61758 197 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 NCS1P62166 190 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 MRPS11P82912 194 aaKnown RBP12.82□□□□□ -0.36
ATG4D-211ENST00000589753 HFEQ30201 348 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 DEFB113Q30KQ7 82 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 CRIP3Q6Q6R5 217 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 ZNF826PQ6ZT77 177 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 CDH24Q86UP0 819 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 PNLDC1Q8NA58 520 aaKnown RBP12.82□□□□□ -0.36
ATG4D-211ENST00000589753 OR5D18Q8NGL1 313 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 OR11L1Q8NGX0 322 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 AQP3Q92482 292 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 CCL17Q92583 94 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 FOXRED1Q96CU9 486 aaPredicted RBP12.82□□□□□ -0.36
ATG4D-211ENST00000589753 MBD6Q96DN6 1003 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 PERPQ96FX8 193 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 BCL7BQ9BQE9 202 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 POLDIP2Q9Y2S7 368 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 CACNG2Q9Y698 323 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 CEPT1Q9Y6K0 416 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 CELSR2Q9HCU4 2923 aa12.82□□□□□ -0.36
ATG4D-211ENST00000589753 LRRC30A6NM36 301 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 LYNX1G3V0Z9 82 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 IFNL4K9M1U5 179 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 SYNGR1O43759 233 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 CDRT1O95170 752 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 LYNX1P0DP58 116 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 IRF2P14316 349 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 COL8A2P25067 703 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 MPZP25189 248 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 ZP1P60852 638 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 IL24Q13007 206 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 PDZK1IP1Q13113 114 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 ZNF181Q2M3W8 571 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 WDR82Q6UXN9 313 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 TGIF2LYQ8IUE0 185 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 ZNF671Q8TAW3 534 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 TNFAIP8L1Q8WVP5 186 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 HPS1Q92902 700 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 YIPF5Q969M3 257 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 GFI1Q99684 422 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 NKX3-1Q99801 234 aaPredicted RBP12.81□□□□□ -0.36
ATG4D-211ENST00000589753 UQCC2Q9BRT2 126 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 FAM192AQ9GZU8 254 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 MYOZ1Q9NP98 299 aaPredicted RBP12.81□□□□□ -0.36
ATG4D-211ENST00000589753 DLL4Q9NR61 685 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 TMEM106BQ9NUM4 274 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 V9GY05 133 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 CACNA1DQ01668 2161 aa12.81□□□□□ -0.36
ATG4D-211ENST00000589753 CCDC160A6NGH7 325 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 SPRY1O43609 319 aaPredicted RBP12.8□□□□□ -0.36
ATG4D-211ENST00000589753 SSX4O60224 188 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 RHBDL1O75783 438 aa12.8□□□□□ -0.36
ATG4D-211ENST00000589753 CYB5AP00167 134 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms